RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ATAD3AQ9NVI7 634 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 FAM86C1Q9NVL1 165 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 ZNF282Q9UDV7 671 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-207ENST00000558763 ZNF639Q9UID6 485 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 WBP11Q9Y2W2 641 aaKnown RBP12.31□□□□□ -0.44
SMAD3-207ENST00000558763 MUC6Q6W4X9 2439 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 A0A0G2JN53 185 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 EVPLLA8MZ36 301 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ISM1B1AKI9 464 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 DLL1O00548 723 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 GSTA4O15217 222 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 DENRO43583 198 aaKnown RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 CCNDBP1O95273 360 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 RAP2AP10114 183 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 FCGR1AP12314 374 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 IL1RNP18510 177 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 FRKP42685 505 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 BLMHQ13867 455 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 NRF1Q16656 503 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 TMEM35AQ53FP2 167 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 OR4C11Q6IEV9 310 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 TCEAL6Q6IPX3 200 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 FAM180BQ6P0A1 224 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ABHD17CQ6PCB6 329 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 PAGE2Q7Z2X7 111 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 SPRED1Q7Z699 444 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 RABEPKQ7Z6M1 372 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 TRIM73Q86UV7 250 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 VPS37AQ8NEZ2 397 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 CEP76Q8TAP6 659 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 FBXO30Q8TB52 745 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 SLC37A2Q8TED4 501 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 UCN3Q969E3 161 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 TCEAL3Q969E4 200 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 RNF145Q96MT1 663 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 FCRL4Q96PJ5 515 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ELF4Q99607 663 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 C17orf62Q9BQA9 187 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 EPS8L2Q9H6S3 715 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 CAPN10Q9HC96 672 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 PRDM7Q9NQW5 492 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 POT1Q9NUX5 634 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 EVA1BQ9NVM1 165 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 UCKL1Q9NWZ5 548 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 CPNE7Q9UBL6 633 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 RAB26Q9ULW5 256 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 AP4B1Q9Y6B7 739 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 SAC3D1A6NKF1 404 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 EIF4E1BA6NMX2 242 aaKnown RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 TNFSF14O43557 240 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 PRKD3O94806 890 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 UGT2B7P16662 529 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ARRB1P49407 418 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 PLA2G16P53816 162 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 PCBP4P57723 403 aaKnown RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 KIR2DS3Q14952 304 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ELOCQ15369 112 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 RGNQ15493 299 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 COX20Q5RI15 118 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 MRM1Q6IN84 353 aaKnown RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ZCCHC8Q6NZY4 707 aaKnown RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 SLC23A3Q6PIS1 610 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 OR2I1PQ8NGU4 316 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ZFPM2Q8WW38 1151 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 LOXL4Q96JB6 756 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 NR1H4Q96RI1 486 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-207ENST00000558763 PRRX2Q99811 253 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ASPSCR1Q9BZE9 553 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ERVMER34-1Q9H9K5 563 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 C5AR2Q9P296 337 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 SPASTQ9UBP0 616 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 GMEB2Q9UKD1 530 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 ACSL6Q9UKU0 697 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 OAZ3Q9UMX2 235 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 VPS4AQ9UN37 437 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 PCDHGB4Q9UN71 923 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 SLC6A14Q9UN76 642 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 SNX7Q9UNH6 387 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 DOLKQ9UPQ8 538 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 PCDHGB5Q9Y5G0 923 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 KLK4Q9Y5K2 254 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
SMAD3-207ENST00000558763 TMEM229AB2RXF0 380 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 B4DGG1 531 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 PDLIM1O00151 329 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 AQP9O43315 295 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 CTSVO60911 334 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 TNFRSF21O75509 655 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 GCM2O75603 506 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-207ENST00000558763 PIAS2O75928 621 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 SERPINA1P01009 418 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 SEMG1P04279 462 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 MAGP20916 626 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 GRK3P35626 688 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 LSSP48449 732 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 BNIP3Q12983 259 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 HLA-BQ31612 363 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMAD3-207ENST00000558763 FCRL6Q6DN72 434 aa12.29□□□□□ -0.44
SMAD3-207ENST00000558763 MARVELD2Q8N4S9 558 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms