RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ZCCHC7Q8N3Z6 543 aaKnown RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 C1orf52Q8N6N3 182 aaKnown RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 FAM47BQ8NA70 645 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 ZSCAN1Q8NBB4 408 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 ZNF75CPQ92670 426 aaPredicted RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 TBC1D20Q96BZ9 403 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 APIPQ96GX9 242 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 OR1F2PQ96R84 312 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 CRB3Q9BUF7 120 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 DDX31Q9H8H2 851 aaKnown RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 THAP1Q9NVV9 213 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 FBXW2Q9UKT8 454 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 A0A0A6YYD5 115 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 CDC14CA4D256 554 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 OR2W5A6NFC9 320 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 FAM227AF5H4B4 570 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 TMPRSS11DO60235 418 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 KLK1P06870 262 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 HEXBP07686 556 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 LINC00032P0C843 101 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 OTX2P32243 289 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 EFNA3P52797 238 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 SPDYAQ5MJ70 313 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 RNF165Q6ZSG1 346 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 PAGE2Q7Z2X7 111 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 EFCAB3Q8N7B9 438 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 OR2T11Q8NH01 316 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 LRRC8CQ8TDW0 803 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 CSF3RQ99062 836 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 LYRM4Q9HD34 91 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 LANCL2Q9NS86 450 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 PNPOQ9NVS9 261 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 HAO1Q9UJM8 370 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 C3orf18Q9UK00 162 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 MKL2Q9ULH7 1088 aa16.45■□□□□ 0.22
TPM1-214ENST00000558544 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.45■□□□□ 0.22
TPM1-214ENST00000558544 CROCCQ5TZA2 2017 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 ARHGAP10A1A4S6 786 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 IDSB3KWA1 339 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 K7ENP7 123 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 SLC28A1O00337 649 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 KLF11O14901 512 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 RGS14O43566 566 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 B4GALT2O60909 372 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 RSL1D1O76021 490 aaKnown RBP16.44■□□□□ 0.22
TPM1-214ENST00000558544 FURINP09958 794 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 IL10P22301 178 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 TPP2P29144 1249 aaPredicted RBP16.44■□□□□ 0.22
TPM1-214ENST00000558544 RPL14P50914 215 aaKnown RBP16.44■□□□□ 0.22
TPM1-214ENST00000558544 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
TPM1-214ENST00000558544 CXADRP78310 365 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 MC1RQ01726 317 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 OCRLQ01968 901 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 CDC20Q12834 499 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 PDCD2Q16342 344 aaPredicted RBP16.44■□□□□ 0.22
TPM1-214ENST00000558544 UGT8Q16880 541 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 SPIN4Q56A73 249 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 INO80CQ6PI98 192 aaPredicted RBP16.44■□□□□ 0.22
TPM1-214ENST00000558544 ADAMTS18Q8TE60 1221 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 CHTF18Q8WVB6 975 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 CRELD1Q96HD1 420 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 VN1R1Q9GZP7 353 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 LYARQ9NX58 379 aaKnown RBP16.44■□□□□ 0.22
TPM1-214ENST00000558544 KCMF1Q9P0J7 381 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 ADAM29Q9UKF5 820 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 CCL27Q9Y4X3 112 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 PKD1L2Q7Z442 2459 aa16.44■□□□□ 0.22
TPM1-214ENST00000558544 JUNP05412 331 aaKnown RBP16.43■□□□□ 0.22
TPM1-214ENST00000558544 CPN2P22792 545 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 JAK1P23458 1154 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 HNRNPFP52597 415 aaKnown RBP16.43■□□□□ 0.22
TPM1-214ENST00000558544 EMP2P54851 167 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 ACSM2AQ08AH3 577 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 VAC14Q08AM6 782 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 SSPNQ14714 243 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 NR6A1Q15406 480 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 TUBB8Q3ZCM7 444 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 CCNYL2Q5T2Q4 361 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 ACSM2BQ68CK6 577 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 FAAH2Q6GMR7 532 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 MRM1Q6IN84 353 aaKnown RBP16.43■□□□□ 0.22
TPM1-214ENST00000558544 Q6ZSR9 355 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 RAB43Q86YS6 212 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 HOMEZQ8IX15 550 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 TMEM52Q8NDY8 209 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 ADAMTS17Q8TE56 1095 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 SEMA3GQ9NS98 782 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 MARCOQ9UEW3 520 aaPredicted RBP16.43■□□□□ 0.22
TPM1-214ENST00000558544 PHF11Q9UIL8 331 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 SPACA6W5XKT8 324 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 MGAQ8IWI9 3026 aa16.43■□□□□ 0.22
TPM1-214ENST00000558544 PCDH7O60245 1069 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 RECKO95980 971 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 FAM58BPP0C7Q3 252 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 PRPH2P23942 346 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 RAE1P78406 368 aaKnown RBP16.42■□□□□ 0.22
TPM1-214ENST00000558544 BTG2P78543 158 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 RHAGQ02094 409 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 TNFRSF17Q02223 184 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 CRTC2Q53ET0 693 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms