RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TEX9Q8N6V9 391 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 CEP112Q8N8E3 955 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 OR7G3Q8NG95 312 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 UHMK1Q8TAS1 419 aaKnown RBP8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 PRR7Q8TB68 274 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 DCAKDQ8WVC6 231 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 UBE2E3Q969T4 207 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 MAGEB10Q96LZ2 347 aaPredicted RBP8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 SERINC2Q96SA4 455 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 SLX1AQ9BQ83 275 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 VPS11Q9H270 941 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 KCMF1Q9P0J7 381 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 NFU1Q9UMS0 254 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 DAPP1Q9UN19 280 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 CROCCQ5TZA2 2017 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF407Q9C0G0 2248 aa8.21□□□□□ -1.09
SNRPA1-206ENST00000558059 NOTCH2Q04721 2471 aa8.21□□□□□ -1.09
SNRPA1-206ENST00000558059 A0A087WUV0 522 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 A0A088AWK7 358 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TRIM49D1C9J1S8 452 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 POC1B-GALNT4F8VUJ3 575 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 RTCAO00442 366 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 SH3BGRLO75368 114 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 AGFG2O95081 481 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 SCELO95171 688 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 SIX3O95343 332 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TGFB1P01137 390 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 PCNAP12004 261 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 GFAPP14136 432 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 EDN3P14138 238 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF10P21506 573 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 ATP5A1P25705 553 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 GCAP28676 217 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 PPP2R1BP30154 601 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 CD96P40200 585 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 GPR143P51810 404 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 HSD17B7P56937 341 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TGM3Q08188 693 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TUBA3CQ13748 450 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 GTF2H2Q13888 395 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 INAQ16352 499 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 MEP1AQ16819 746 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TMEM35AQ53FP2 167 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 DEPDC1Q5TB30 811 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 LIPJQ5W064 366 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 GTF2H2CQ6P1K8 395 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 KLC3Q6P597 504 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TUBA3EQ6PEY2 450 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 FAM180AQ6UWF9 173 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 RPS19BP1Q86WX3 136 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 IFT20Q8IY31 132 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF595Q8IYB9 648 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 LGI4Q8N135 537 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 RNF175Q8N4F7 328 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 SLC5A8Q8N695 610 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 BCORP1Q8N888 145 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 FAM47BQ8NA70 645 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 APCDD1LQ8NCL9 501 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 MDS2Q8NDY4 140 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 SRFBP1Q8NEF9 429 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 ADAMTS18Q8TE60 1221 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 CMTM7Q96FZ5 175 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 SIGLEC12Q96PQ1 595 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 KCNC2Q96PR1 638 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 CSF3RQ99062 836 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 MAPKAP1Q9BPZ7 522 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TBCDQ9BTW9 1192 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TXLNGYQ9BZA5 131 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 OR51B5Q9H339 312 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 CDCP1Q9H5V8 836 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 LYRM4Q9HD34 91 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 PRTFDC1Q9NRG1 225 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 CPSF2Q9P2I0 782 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 ERRFI1Q9UJM3 462 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF180Q9UJW8 692 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 PPIEQ9UNP9 301 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 TSC22D4Q9Y3Q8 395 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 CELSR2Q9HCU4 2923 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 ITPR2Q14571 2701 aa8.21□□□□□ -1.1
SNRPA1-206ENST00000558059 UNC79Q9P2D8 2635 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 WIPF3A6NGB9 483 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 GABRR3A8MPY1 467 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 H0YIV9 168 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 CLDN4O14493 209 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 OR7A17O14581 309 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 UGDHO60701 494 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 CTNSO60931 367 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 KRT38O76015 456 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 WISP2O76076 250 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 MYO1DO94832 1006 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ABHD2P08910 425 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 RBP1P09455 135 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 SBK3P0C264 359 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 FAM153BP0C7A2 387 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 RHOXF2BP0C7M4 288 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 COL6A2P12110 1019 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 HIST1H1TP22492 207 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 CNTFP26441 200 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 SERPINB1P30740 379 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms