RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 NXPE4Q6UWF7 544 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 SLC46A3Q7Z3Q1 461 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 GRASPQ7Z6J2 395 aaPredicted RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 RBM45Q8IUH3 476 aaKnown RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 GOT1L1Q8NHS2 421 aaPredicted RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 ARRDC3Q96B67 414 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 OTUB1Q96FW1 271 aaPredicted RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 FAM83CQ9BQN1 747 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 EHD1Q9H4M9 534 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 C11orf16Q9NQ32 467 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 MIEF1Q9NQG6 463 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 TM7SF3Q9NS93 570 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 SCHIP1Q9P0W5 487 aaPredicted RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 POFUT2Q9Y2G5 429 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 RANBP2P49792 3224 aaKnown RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 TRBV4-1A0A0J9YWV2 114 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 METTL15A6NJ78 407 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 WASHC1A8K0Z3 465 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 PRRT4C9JH25 899 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 FFAR1O14842 300 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 GADD45GO95257 159 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 PSMB5P28074 263 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 GRK3P35626 688 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 EIF2DP41214 584 aaKnown RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 XCR1P46094 333 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 CNTN1Q12860 1018 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 PDE7AQ13946 482 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 TBCEQ15813 527 aaPredicted RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 WASH2PQ6VEQ5 465 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 BCDIN3DQ7Z5W3 292 aaKnown RBP16.91■□□□□ 0.3
XRCC3-218ENST00000557439 NLRP8Q86W28 1048 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 LAS2Q8IYD9 372 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 MYDGFQ969H8 173 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 SGPP1Q9BX95 441 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 ATAD3AQ9NVI7 634 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 ASF1AQ9Y294 204 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 PTPRSQ13332 1948 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 KIAA1549LQ6ZVL6 1849 aa16.91■□□□□ 0.3
XRCC3-218ENST00000557439 FEZF1A0PJY2 475 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 QSOX1O00391 747 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 SEMA7AO75326 666 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 TBX6O95947 436 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 GNRH1P01148 92 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 BCHEP06276 602 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 ANXA8P13928 327 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 DMC1Q14565 340 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 MED22Q15528 200 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 ADGRF3Q8IZF5 1079 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 HORMAD2Q8N7B1 307 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 FAM210AQ96ND0 272 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 F2RL3Q96RI0 385 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 CDADC1Q9BWV3 514 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 GPBP1L1Q9HC44 474 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 CUEDC1Q9NWM3 386 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 CHD9Q3L8U1 2897 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 TRIM43BA6NCK2 446 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 DPM1O60762 260 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 SPNP16150 400 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 EPCAMP16422 314 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 CNR2P34972 360 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 SLC6A11P48066 632 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 DGKGP49619 791 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 PNLIPRP1P54315 467 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 FCHO2Q0JRZ9 810 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 E2F2Q14209 437 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 DHCR24Q15392 516 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 C10orf62Q5T681 223 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 TRIM40Q6P9F5 258 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 CEACAM20Q6UY09 585 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 KLHDC8AQ8IYD2 350 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 METTL4Q8N3J2 472 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 PLA2G15Q8NCC3 412 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 VANGL1Q8TAA9 524 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 TRIM43Q96BQ3 446 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 REPS1Q96D71 796 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 METTL2AQ96IZ6 378 aaKnown RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 COQ10AQ96MF6 247 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 PIP5K1AQ99755 562 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 EFCAB11Q9BUY7 163 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 NMNAT1Q9HAN9 279 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 CCDC177Q9NQR7 707 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 FKBP14Q9NWM8 211 aa16.9■□□□□ 0.3
XRCC3-218ENST00000557439 KIAA0100Q14667 2235 aaKnown RBP16.9■□□□□ 0.3
XRCC3-218ENST00000557439 A8MU76 341 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 AQP9O43315 295 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 C6P13671 934 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 CEBPBP17676 345 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 CHMP24386 653 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 HSPB3Q12988 150 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 KIAA0907Q7Z7F0 614 aaPredicted RBP16.89■□□□□ 0.3
XRCC3-218ENST00000557439 OXR1Q8N573 874 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 CELF5Q8N6W0 485 aaKnown RBP16.89■□□□□ 0.3
XRCC3-218ENST00000557439 ZDHHC5Q9C0B5 715 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF556Q9HAH1 456 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 MYNNQ9NPC7 610 aa16.89■□□□□ 0.3
XRCC3-218ENST00000557439 FAM32AQ9Y421 112 aaKnown RBP16.89■□□□□ 0.3
XRCC3-218ENST00000557439 NUMA1Q14980 2115 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 ANKDD1BA6NHY2 528 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 PPM1DO15297 605 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 B4GALT2O60909 372 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms