RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MYOCOSA0A1B0GUC4 107 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 TGFBR3LH3BV60 316 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 NDUFS4O43181 175 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 PSIP1O75475 530 aaKnown RBP11.43□□□□□ -0.58
PSEN1-220ENST00000557037 STK10O94804 968 aaKnown RBP11.43□□□□□ -0.58
PSEN1-220ENST00000557037 ACSL3O95573 720 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 CATP04040 527 aaKnown RBP11.43□□□□□ -0.58
PSEN1-220ENST00000557037 PGRP06401 933 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 PPARGP37231 505 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-220ENST00000557037 HNF4AP41235 474 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 DIO3P55073 304 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 EIF3BP55884 814 aaKnown RBP11.43□□□□□ -0.58
PSEN1-220ENST00000557037 RAB8AP61006 207 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 RPS4XP62701 263 aaKnown RBP11.43□□□□□ -0.58
PSEN1-220ENST00000557037 MYL5Q02045 173 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 ETFDHQ16134 617 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 FAM174BQ3ZCQ3 159 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 ACSBG2Q5FVE4 666 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 LIPNQ5VXI9 398 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 VASNQ6EMK4 673 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF704Q6ZNC4 412 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-220ENST00000557037 CAND1Q86VP6 1230 aaKnown RBP11.43□□□□□ -0.58
PSEN1-220ENST00000557037 SPNS2Q8IVW8 549 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 MFSD9Q8NBP5 474 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 WDYHV1Q96HA8 205 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 MRFAP1L1Q96HT8 127 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF778Q96MU6 729 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 UGT2B28Q9BY64 529 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 NUP62CLQ9H1M0 184 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 P2RY12Q9H244 342 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 PIGMQ9H3S5 423 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 PROK2Q9HC23 129 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 QPCTLQ9NXS2 382 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF148Q9UQR1 794 aa11.43□□□□□ -0.58
PSEN1-220ENST00000557037 hCG_1818297A0A087WSY0 165 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 MACROD2A1Z1Q3 448 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 TMCC2O75069 709 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 SMNDC1O75940 238 aaKnown RBP eCLIP11.42□□□□□ -0.58
PSEN1-220ENST00000557037 SERPING1P05155 500 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 HRH2P25021 359 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 CCKARP32238 428 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 CDKN1AP38936 164 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 CASP9P55211 416 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 SKP1P63208 163 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 RCAN2Q14206 197 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 KCNJ11Q14654 390 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 KLHL38Q2WGJ6 581 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 TMEM249Q2WGJ8 235 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 ANKRD34AQ69YU3 496 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 HIST2H2BDQ6DRA6 164 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 C22orf34Q6ZV56 151 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 MEX3DQ86XN8 651 aaKnown RBP11.42□□□□□ -0.58
PSEN1-220ENST00000557037 SLC35G2Q8TBE7 412 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 TRMT61AQ96FX7 289 aaKnown RBP11.42□□□□□ -0.58
PSEN1-220ENST00000557037 C1orf159Q96HA4 380 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 ART5Q96L15 291 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 LRRC40Q9H9A6 602 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 CATSPERZQ9NTU4 200 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 TMEM160Q9NX00 188 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 PACSIN3Q9UKS6 424 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 NENFQ9UMX5 172 aa11.42□□□□□ -0.58
PSEN1-220ENST00000557037 HS3ST1O14792 307 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 NIPSNAP2O75323 286 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 RCBTB2O95199 551 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 IGHV4-39P01824 125 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 CDH1P12830 882 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 CYP4B1P13584 511 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 CD79BP40259 229 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 RNF4P78317 190 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 PRAMEP78395 509 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 DEFA6Q01524 100 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 ASPHQ12797 758 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 AARS2Q5JTZ9 985 aaKnown RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 CTSL3PQ5NE16 218 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 TSTD2Q5T7W7 516 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 CCDC181Q5TID7 509 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 DARS2Q6PI48 645 aaKnown RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 CLNKQ7Z7G1 428 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 CDKL3Q8IVW4 592 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 CA13Q8N1Q1 262 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF611Q8N823 705 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 OR52K1Q8NGK4 314 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 SGMS2Q8NHU3 365 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 GTPBP3Q969Y2 492 aaKnown RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 ALKBH8Q96BT7 664 aaKnown RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 QRFPRQ96P65 431 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 PPP1R2P1Q96PQ5 205 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 PANX2Q96RD6 677 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 TUBA1CQ9BQE3 449 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 OR8D2Q9GZM6 311 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 ESRP2Q9H6T0 727 aaKnown RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 ZNHIT6Q9NWK9 470 aaKnown RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 GALPQ9UBC7 116 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 ANAPC5Q9UJX4 755 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 MMACHCQ9Y4U1 282 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 PCDHA13Q9Y5I0 950 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
PSEN1-220ENST00000557037 YLPM1P49750 1951 aaKnown RBP11.41□□□□□ -0.58
PSEN1-220ENST00000557037 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms