RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ITM2BQ9Y287 266 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 NCKAP1Q9Y2A7 1128 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 AP3M1Q9Y2T2 418 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 TMED5Q9Y3A6 229 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 RNF11Q9Y3C5 154 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 L3MBTL1Q9Y468 752 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 CCL27Q9Y4X3 112 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 PCDHGA7Q9Y5G6 932 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 KCNE2Q9Y6J6 123 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 MYO15AQ9UKN7 3530 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 CHD8Q9HCK8 2581 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 MUC6Q6W4X9 2439 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 TET1Q8NFU7 2136 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 C15orf38-AP3S2A0A0A6YYH1 394 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 KANSL1LA0AUZ9 987 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 DIRC3C9JPN6 131 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 E7ENX8 843 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 H0Y3Z8 333 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 H0YIV9 168 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 NR5A2O00482 541 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ACOT8O14734 319 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 LSM1O15116 133 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 KMOO15229 486 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 NVLO15381 856 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 PI15O43692 258 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 TMEM127O75204 238 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 TBX10O75333 385 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 EEDO75530 441 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 RSL1D1O76021 490 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 PDE5AO76074 875 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 MYO1DO94832 1006 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 C1orf105O95561 183 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 SOD1P00441 154 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 DNTTP04053 509 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 HOXC4P09017 264 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 G6PDP11413 515 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 HSD3B1P14060 373 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 JUPP14923 745 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ACADSP16219 412 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ZNF8P17098 575 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 KELP23276 732 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 JAK1P23458 1154 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PRPH2P23942 346 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 HSD3B2P26439 372 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 TRIM23P36406 574 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 HALP42357 657 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 WASP42768 502 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PNLIPRP1P54315 467 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 NME5P56597 212 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PFN3P60673 137 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 UFM1P61960 85 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 RPS14P62263 151 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 BNIP2Q12982 314 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 CHIT1Q13231 466 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 NAE1Q13564 534 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 HTR4Q13639 388 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 CCNIQ14094 377 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 RCAN2Q14206 197 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 FLOT2Q14254 428 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ARHGAP19Q14CB8 494 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 WSCD2Q2TBF2 565 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 AASDHQ4L235 1098 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 ZNF658BQ4V348 819 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 RFTN2Q52LD8 501 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 CMPK2Q5EBM0 449 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 XKR6Q5GH73 641 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PAGE2BQ5JRK9 111 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PRAMEF14Q5SWL7 426 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PIP5KL1Q5T9C9 394 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 FRG2Q64ET8 278 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ICE2Q659A1 982 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 REP15Q6BDI9 236 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 CAPN13Q6MZZ7 669 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 KIAA1161Q6NSJ0 714 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 C8orf82Q6P1X6 216 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 CYP20A1Q6UW02 462 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 LAYNQ6UX15 382 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 UNC5DQ6UXZ4 953 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 LPCAT2Q7L5N7 544 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ARPINQ7Z6K5 226 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ZFAND4Q86XD8 727 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 DHFR2Q86XF0 187 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 TRAPPC5Q8IUR0 188 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 LYSMD2Q8IV50 215 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 AADATQ8N5Z0 425 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 DPP10Q8N608 796 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 OR9A1PQ8NGU1 263 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 OR2T11Q8NH01 316 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 OR56A3Q8NH54 315 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 HMGCLL1Q8TB92 370 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 HM13Q8TCT9 377 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 SELENOMQ8WWX9 145 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 DNAJC9Q8WXX5 260 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 USP7Q93009 1102 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 UBE2E3Q969T4 207 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ZUFSPQ96AP4 578 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 RAD51AP1Q96B01 352 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 LRRC58Q96CX6 371 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ASB9Q96DX5 294 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 SPDL1Q96EA4 605 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms