RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ZBTB11O95625 1053 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PDGFBP01127 241 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 IGLV3-27P01718 113 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CHRNA1P02708 482 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MT-ND1P03886 318 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 RETP07949 1114 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 GNAO1P09471 354 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CNPP09543 421 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 IRF1P10914 325 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 EGR2P11161 476 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 G6PDP11413 515 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PRPS2P11908 318 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MTHFD2P13995 350 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 SLC2A4P14672 509 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 TYRP1P17643 537 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 IGFBP5P24593 272 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ELK4P28324 431 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 SERPINB1P30740 379 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CORO1AP31146 461 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 S100A3P33764 101 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ATP5C1P36542 298 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 RXRGP48443 463 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MAPK10P53779 464 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 FOXA1P55317 472 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 OR4D2P58180 307 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 C21orf58P58505 322 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 WDR5P61964 334 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ADARB1P78563 741 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MRPS21P82921 87 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 NHLH2Q02577 135 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 TAF10Q12962 218 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 HNRNPA0Q13151 305 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CBX3Q13185 183 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PMS2P3Q13401 168 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PCBP2Q15366 365 aaKnown RBP eCLIP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 TGFBIQ15582 683 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 DGUOKQ16854 277 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 AP5B1Q2VPB7 878 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 TBC1D25Q3MII6 688 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CYBRD1Q53TN4 286 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 TCEAL5Q5H9L2 206 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PAGE3Q5JUK9 113 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 C6orf136Q5SQH8 315 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ARMC12Q5T9G4 340 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 FAM171A1Q5VUB5 890 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 SDHAF4Q5VUM1 108 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ATG9BQ674R7 924 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 SULT1C3Q6IMI6 304 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 NIPAL1Q6NVV3 410 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 METTL2BQ6P1Q9 378 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ERICH5Q6P6B1 374 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF783Q6ZMS7 281 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 RNF165Q6ZSG1 346 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 NEK10Q6ZWH5 1172 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CHST9Q7L1S5 443 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 LRRC70Q7Z2Q7 622 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PLD3Q8IV08 490 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MICU2Q8IYU8 434 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF683Q8IZ20 524 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PARP8Q8N3A8 854 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 TMEM105Q8N8V8 129 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ZBTB8BQ8NAP8 495 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 BEND2Q8NDZ0 799 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 OR7D4Q8NG98 312 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 OR7A2PQ8NGA2 310 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 OR4F6Q8NGB9 312 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 TBC1D15Q8TC07 691 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CD200R1Q8TD46 325 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 OVCA2Q8WZ82 227 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 FCGR1BQ92637 280 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 RORBQ92753 470 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 IGSF8Q969P0 613 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 RAX2Q96IS3 184 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MUS81Q96NY9 551 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PSKH2Q96QS6 385 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 NODALQ96S42 347 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ACOX2Q99424 681 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 DOK1Q99704 481 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 DGCR6LQ9BY27 220 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MRPL9Q9BYD2 267 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF768Q9H5H4 540 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ELOVL6Q9H5J4 265 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PIF1Q9H611 641 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 GORASP2Q9H8Y8 452 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ANKHQ9HCJ1 492 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 USE1Q9NZ43 259 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 HSFX1Q9UBD0 423 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 KLQ9UEF7 1012 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 RPS6KA6Q9UK32 745 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 LSM7Q9UK45 103 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PSME2Q9UL46 239 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 SNX6Q9UNH7 406 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MAPRE3Q9UPY8 281 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CORO2BQ9UQ03 480 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 RAI2Q9Y5P3 530 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 MYO18AQ92614 2054 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 GREB1Q4ZG55 1949 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ASH1LQ9NR48 2969 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 NAV2Q8IVL1 2488 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 GCN1Q92616 2671 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms