RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 EXT2Q93063 718 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 MR1Q95460 341 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 KIAA1143Q96AT1 154 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 VPS39Q96JC1 886 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 PKP4Q99569 1192 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 EGFL8Q99944 293 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 SPRTNQ9H040 489 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ATG10Q9H0Y0 220 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 CAB39LQ9H9S4 337 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FBXO8Q9NRD0 319 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FGF21Q9NSA1 209 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 STARD5Q9NSY2 213 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 NSMCE4AQ9NXX6 385 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 SPHK1Q9NYA1 384 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 UTP6Q9NYH9 597 aaKnown RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 GRHL1Q9NZI5 618 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 FOXJ2Q9P0K8 574 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 RALYQ9UKM9 306 aaKnown RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 NFU1Q9UMS0 254 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 CDYLQ9Y232 598 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 MTO1Q9Y2Z2 717 aaKnown RBP4.46□□□□□ -1.7
ATXN3-238ENST00000556288 PSAT1Q9Y617 370 aa4.46□□□□□ -1.7
ATXN3-238ENST00000556288 ACACBO00763 2458 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 A0A0J9YVX5 310 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 A0A0J9YY10 115 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 NCF1BA6NI72 391 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 NCF1CA8MVU1 366 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 B4E171 279 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 STMND1H3BQB6 276 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 OVOL3O00110 214 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 F2RL2O00254 374 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 RASGRF2O14827 1237 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CLGNO14967 610 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TOX3O15405 576 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 RAD1O60671 282 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 FZD7O75084 574 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SLC43A1O75387 559 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SCRG1O75711 98 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 OR2B3O76000 313 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 STK17BO94768 372 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SCGB1D2O95969 90 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 STATHP02808 62 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 GSTA2P09210 222 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CCDC166P0CW27 439 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TPBGLP0DKB5 382 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 MPC1LP0DKB6 136 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CBSLP0DN79 551 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 PRKAR1AP10644 381 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 NCF1P14598 390 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TCN2P20062 427 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 MAKP20794 623 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 NR4A1P22736 598 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 GCSHP23434 173 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 PSMB5P28074 263 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 GABRB3P28472 473 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 OAS2P29728 719 aaKnown RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CMPK1P30085 196 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 STX2P32856 288 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SPRP35270 261 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CBSP35520 551 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 DLSTP36957 453 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TSPAN7P41732 249 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 MSH2P43246 934 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 RAB28P51157 221 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 MAP2K6P52564 334 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 PNLIPRP1P54315 467 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 VSX2P58304 361 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TAS2R39P59534 338 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 GPX6P59796 221 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CYP4F2P78329 520 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SRSF6Q13247 344 aaKnown RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 NAE1Q13564 534 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 ERV3-1Q14264 604 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 FASTKQ14296 549 aaKnown RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 IL11RAQ14626 422 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 KIR2DS3Q14952 304 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SLMAPQ14BN4 828 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 DEFB110Q30KQ9 67 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 KBTBD12Q3ZCT8 623 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 GRTP1Q5TC63 336 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 PRAMEF17Q5VTA0 474 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 C1orf189Q5VU69 101 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 MLIPQ5VWP3 458 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 KIAA1614Q5VZ46 1190 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 ARMC3Q5W041 872 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 STEAP4Q687X5 459 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 IGFL4Q6B9Z1 124 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 PWWP2BQ6NUJ5 590 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CYB5D1Q6P9G0 228 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SPESP1Q6UW49 350 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 ZDHHC24Q6UX98 284 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 CYHR1Q6ZMK1 362 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 KIAA0408Q6ZU52 694 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 DCUN1D3Q8IWE4 304 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 OR2L8Q8NGY9 312 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 UBLCP1Q8WVY7 318 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 SLC22A18Q96BI1 424 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 C1GALT1C1Q96EU7 318 aa4.45□□□□□ -1.7
ATXN3-238ENST00000556288 MARS2Q96GW9 593 aaKnown RBP4.45□□□□□ -1.7
ATXN3-238ENST00000556288 TRAPPC9Q96Q05 1148 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms