RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TXLNGQ9NUQ3 528 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 MS4A12Q9NXJ0 267 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 SLC39A1Q9NY26 324 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 ASB4Q9Y574 426 aa10.45□□□□□ -0.74
TMEM260-208ENST00000555905 A0A1B0GX78 115 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 DYTNA2CJ06 578 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 ZNF860A6NHJ4 632 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 H0YIG0 161 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 NR5A2O00482 541 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 SCAMP2O15127 329 aaKnown RBP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 FOXS1O43638 330 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 HYAL3O43820 417 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 RDH16O75452 317 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 MED26O95402 600 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 IL6P05231 212 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 SNRPB2P08579 225 aaKnown RBP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 JMJD7P0C870 316 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 SPTBP11277 2137 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 CCL4P13236 92 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 COX7A2P14406 83 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 DRD2P14416 443 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 PRDX6P30041 224 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 BUD31P41223 144 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 ALDH9A1P49189 494 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 LIM2P55344 173 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 CLDN6P56747 220 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 C21orf58P58505 322 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 CYLC2Q14093 348 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 DPY19L1Q2PZI1 675 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 PGS1Q32NB8 556 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 DCAF12Q5T6F0 453 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 NDUFAF5Q5TEU4 345 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 FAM71E1Q6IPT2 247 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 PWWP2BQ6NUJ5 590 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 PRMT9Q6P2P2 845 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 C6orf89Q6UWU4 347 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 CEACAM20Q6UY09 585 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 TMPRSS12Q86WS5 348 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 RIMKLAQ8IXN7 391 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 CACTIN-AS1Q8N1I8 211 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 METTL27Q8N6F8 245 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 OR9I1Q8NGQ6 314 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 TESCQ96BS2 214 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 PPCDCQ96CD2 204 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 CLIP3Q96DZ5 547 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 MTERF3Q96E29 417 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 MMABQ96EY8 250 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-208ENST00000555905 TEX37Q96LM6 180 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 MAPKAP1Q9BPZ7 522 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 ZPBPQ9BS86 351 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 SLC25A23Q9BV35 468 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 ACTL8Q9H568 366 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 CLMPQ9H6B4 373 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 REEP4Q9H6H4 257 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 WDR41Q9HAD4 459 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 MIEF1Q9NQG6 463 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 ATAD3AQ9NVI7 634 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 FBXW2Q9UKT8 454 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 DAPP1Q9UN19 280 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 PCDHB3Q9Y5E6 796 aa10.44□□□□□ -0.74
TMEM260-208ENST00000555905 GVINP1Q7Z2Y8 2422 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 A0A1W2PR48 441 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 C1orf226A1L170 272 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 CCDC154A6NI56 674 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 PLD2O14939 933 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 PROM1O43490 865 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 UBOX5O94941 541 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 KCNK5O95279 499 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 FURINP09958 794 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 NR2F6P10588 404 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 COX4I1P13073 169 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 RNH1P13489 461 aaKnown RBP10.43□□□□□ -0.74
TMEM260-208ENST00000555905 DDCP20711 480 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 FBLP22087 321 aaKnown RBP10.43□□□□□ -0.74
TMEM260-208ENST00000555905 CPN2P22792 545 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 S100A3P33764 101 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 GCGRP47871 477 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 MNAT1P51948 309 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 MAPK10P53779 464 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 HNRNPH2P55795 449 aaKnown RBP10.43□□□□□ -0.74
TMEM260-208ENST00000555905 RAB38P57729 211 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 SNRPNP63162 240 aaKnown RBP10.43□□□□□ -0.74
TMEM260-208ENST00000555905 OLR1P78380 273 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 TNFRSF17Q02223 184 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 SRSF11Q05519 484 aaKnown RBP10.43□□□□□ -0.74
TMEM260-208ENST00000555905 ACTN3Q08043 901 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-208ENST00000555905 STX5Q13190 355 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 RUNX2Q13950 521 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 COL9A2Q14055 689 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-208ENST00000555905 RCAN2Q14206 197 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 RSPO4Q2I0M5 234 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-208ENST00000555905 FAM174BQ3ZCQ3 159 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 CPTPQ5TA50 214 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 PRAMEF17Q5VTA0 474 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 C1orf189Q5VU69 101 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 RHBDD2Q6NTF9 364 aa10.43□□□□□ -0.74
TMEM260-208ENST00000555905 RIPOR1Q6ZS17 1223 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms