RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 RABEP2Q9H5N1 569 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 TNFRSF12AQ9NP84 129 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 RIC8BQ9NVN3 520 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 TRPC4Q9UBN4 977 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 ADGRE2Q9UHX3 823 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF225Q9UK10 706 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 MRPS2Q9Y399 296 aaKnown RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 TIMM22Q9Y584 194 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 DNAJC15Q9Y5T4 150 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 LRRK2Q5S007 2527 aa9.11□□□□□ -0.95
ACTN1-215ENST00000555616 SPENQ96T58 3664 aaKnown RBP9.11□□□□□ -0.95
ACTN1-215ENST00000555616 PCM1Q15154 2024 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 SEC16AO15027 2179 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 A0A0A6YYC8 382 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 A0A0G2JND7 137 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 TRBC2A0A5B9 178 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 I3L1I5 382 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 SLC28A1O00337 649 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 EBAG9O00559 213 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 PCDH17O14917 1159 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 SNX3O60493 162 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 KLHL41O60662 606 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 DPM1O60762 260 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 PRAMEF4O60810 478 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 DIAPH2O60879 1101 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 VPS4BO75351 444 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 NSA2O95478 260 aaKnown RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 ALPPP05187 535 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 PCNAP12004 261 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 HSD3B1P14060 373 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 CD22P20273 847 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 HSD3B2P26439 372 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 GSTM2P28161 218 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 SERPINB3P29508 390 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 FOXA1P55317 472 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 SNRPNP63162 240 aaKnown RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 AIMP2Q13155 320 aaKnown RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 NDUFA9Q16795 377 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 IMPG1Q17R60 797 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 UGT3A2Q3SY77 523 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 PRAMEF9Q5VWM5 478 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 RNF165Q6ZSG1 346 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 ACAD11Q709F0 780 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 PIGWQ7Z7B1 504 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 ASPGQ86U10 573 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 ZC3H7AQ8IWR0 971 aaKnown RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 LAS2Q8IYD9 372 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 GALNT16Q8N428 558 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 GBP7Q8N8V2 638 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 MFSD9Q8NBP5 474 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 CAMKVQ8NCB2 501 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 TTLQ8NG68 377 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 OR7G3Q8NG95 312 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 OR11G2Q8NGC1 345 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 SELENOMQ8WWX9 145 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 STON2Q8WXE9 905 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 THOC1Q96FV9 657 aaKnown RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 VPS50Q96JG6 964 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 NUF2Q9BZD4 464 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 TGIF2Q9GZN2 237 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 CLMPQ9H6B4 373 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 NT5DC2Q9H857 520 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 MEAF6Q9HAF1 191 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 MKKSQ9NPJ1 570 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 NMRK1Q9NWW6 199 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 C5AR2Q9P296 337 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 C3orf18Q9UK00 162 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF490Q9ULM2 529 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-215ENST00000555616 TSC22D4Q9Y3Q8 395 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 MAP4K5Q9Y4K4 846 aa9.1□□□□□ -0.95
ACTN1-215ENST00000555616 NUP210LQ5VU65 1888 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 FEZF1A0PJY2 475 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 ERICH4A6NGS2 130 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 ANKDD1BA6NHY2 528 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 A6NL46 340 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 IDSB3KWA1 339 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 H0YIG0 161 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 PIP5K1BO14986 540 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 RGS14O43566 566 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 OR1F1O43749 312 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 STATHP02808 62 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 CYC1P08574 325 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 SLC35G6P0C7Q6 338 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 ACPPP15309 386 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 AHRP35869 848 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 PIK3CBP42338 1070 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 AVPR1BP47901 424 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 ARFIP2P53365 341 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 MEF2AQ02078 507 aaPredicted RBP9.09□□□□□ -0.95
ACTN1-215ENST00000555616 BTKQ06187 659 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 DMTNQ08495 405 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 CSTF3Q12996 717 aaKnown RBP9.09□□□□□ -0.95
ACTN1-215ENST00000555616 RAPSNQ13702 412 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 DDX39BQ13838 428 aaKnown RBP9.09□□□□□ -0.95
ACTN1-215ENST00000555616 RBBP5Q15291 538 aaKnown RBP9.09□□□□□ -0.95
ACTN1-215ENST00000555616 NADK2Q4G0N4 442 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 SGO1Q5FBB7 561 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 VWA2Q5GFL6 755 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 COLEC12Q5KU26 742 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms