RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LRCH4O75427 683 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 CXCL14O95715 111 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 EPOP01588 193 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 IGHEP01854 428 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 AMBPP02760 352 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 LYNP07948 512 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 MARCKSP29966 332 aaPredicted RBP4.63□□□□□ -1.67
VRK1-205ENST00000555402 HLA-FP30511 346 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 CNN1P51911 297 aaKnown RBP4.63□□□□□ -1.67
VRK1-205ENST00000555402 IRX4P78413 519 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 GPR50Q13585 617 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 CCDC40Q4G0X9 1142 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 TOR1AIP1Q5JTV8 583 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 PRAMEF7Q5VXH5 474 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 FIP1L1Q6UN15 594 aaKnown RBP4.63□□□□□ -1.67
VRK1-205ENST00000555402 MFSD7Q6UXD7 560 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 ADAMTSL2Q86TH1 951 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 CCDC197Q8NCU1 140 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 TMEM185AQ8NFB2 350 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 RPLP0P6Q8NHW5 317 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 CHURC1Q8WUH1 139 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 TMEM190Q8WZ59 177 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 LRR1Q96L50 414 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 CXorf58Q96LI9 332 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 NAP1L5Q96NT1 182 aaPredicted RBP4.63□□□□□ -1.67
VRK1-205ENST00000555402 CCM2Q9BSQ5 444 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 WDR13Q9H1Z4 485 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 CARD9Q9H257 536 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 KCNMB3Q9NPA1 279 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 UBE2TQ9NPD8 197 aaPredicted RBP4.63□□□□□ -1.67
VRK1-205ENST00000555402 FAM212BQ9NTI7 297 aaPredicted RBP4.63□□□□□ -1.67
VRK1-205ENST00000555402 PIGVQ9NUD9 493 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 TRIM10Q9UDY6 481 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 CCPG1Q9ULG6 757 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 NEDD4P46934 1319 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 DISP3Q9P2K9 1392 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 SNED1Q8TER0 1413 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 GLTPD2A6NH11 291 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 C15orf61A6NNL5 157 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 PRPSAP2O60256 369 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 B3GALNT1O75752 331 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 NXPH2O95156 264 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 CPNE6O95741 557 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 RPLP0P05388 317 aaKnown RBP4.62□□□□□ -1.67
VRK1-205ENST00000555402 SFTPBP07988 381 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 CYP3A5P20815 502 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 SFNP31947 248 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 PITPNBP48739 271 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 VEGFCP49767 419 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 GNB1P62873 340 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 GABPAQ06546 454 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 CARTPTQ16568 116 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 C3AR1Q16581 482 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 HLA-BQ31612 363 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 SPANXN4Q5MJ08 99 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 CYP4V2Q6ZWL3 525 aaPredicted RBP4.62□□□□□ -1.67
VRK1-205ENST00000555402 HDDC3Q8N4P3 179 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 ANKRD20A12PQ8NF67 263 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 OR52E1Q8NGJ3 308 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 CD99L2Q8TCZ2 262 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 GPR148Q8TDV2 347 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 SLCO4A1Q96BD0 722 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 LURAP1Q96LR2 239 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 NSMCE2Q96MF7 247 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 KRT23Q9C075 422 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 S100A14Q9HCY8 104 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 ATAD3AQ9NVI7 634 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 C2orf42Q9NWW7 574 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.62□□□□□ -1.67
VRK1-205ENST00000555402 LNPEPQ9UIQ6 1025 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 OR1A2Q9Y585 309 aa4.62□□□□□ -1.67
VRK1-205ENST00000555402 ATP6AP2A0A1C7CYW4 349 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 MEIOCA2RUB1 952 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 EEF2KO00418 725 aaKnown RBP4.61□□□□□ -1.67
VRK1-205ENST00000555402 SIGLEC5O15389 551 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 CLDN1O95832 211 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 MT-ATP6P00846 226 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 C4BPBP20851 252 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 IL10P22301 178 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 MMP12P39900 470 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 OPRL1P41146 370 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 ATXN3P54252 364 aaPredicted RBP4.61□□□□□ -1.67
VRK1-205ENST00000555402 GEMP55040 296 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 HERV-K104P63124 156 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 HEPACAMQ14CZ8 416 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 TRADDQ15628 312 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 WLSQ5T9L3 541 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 PLPP4Q5VZY2 271 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 CES4AQ5XG92 561 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 OR6B2Q6IFH4 312 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 DLEU7Q6UYE1 221 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 FAM43BQ6ZT52 329 aaPredicted RBP4.61□□□□□ -1.67
VRK1-205ENST00000555402 Q6ZVQ6 151 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 TAF8Q7Z7C8 310 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 NLRP14Q86W24 1093 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 KLHDC8BQ8IXV7 354 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 SLC22A15Q8IZD6 547 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 FAM76AQ8TAV0 307 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 TBC1D31Q96DN5 1066 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 FAM111AQ96PZ2 611 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms