RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 IGHEP01854 428 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 JAK1P23458 1154 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 EMP2P54851 167 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 RAB38P57729 211 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 HMGCS1Q01581 520 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 SLAMF1Q13291 335 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 TUBB8Q3ZCM7 444 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 COMMD6Q7Z4G1 85 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 PPP1R32Q7Z5V6 425 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 RAB43Q86YS6 212 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 TRIM42Q8IWZ5 723 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 CHTF18Q8WVB6 975 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 SORT1Q99523 831 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 TUBB1Q9H4B7 451 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 HAO1Q9UJM8 370 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 CCL27Q9Y4X3 112 aa20.21■□□□□ 0.83
SDR39U1-208ENST00000554698 FAM227AF5H4B4 570 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 PSMD12O00232 456 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 CYR61O00622 381 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 TMPRSS11DO60235 418 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 HEXBP07686 556 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 OTX2P32243 289 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 MINDY4Q4G0A6 757 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 MRM1Q6IN84 353 aaKnown RBP20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 C19orf48Q6RUI8 117 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 PAGE2Q7Z2X7 111 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 MRGPREQ86SM8 312 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 AGR3Q8TD06 166 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 THAP4Q8WY91 577 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 C11orf24Q96F05 449 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 MAPKAP1Q9BPZ7 522 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 FIS1Q9Y3D6 152 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 RAP2CQ9Y3L5 183 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 HS3ST3B1Q9Y662 390 aa20.2■□□□□ 0.82
SDR39U1-208ENST00000554698 SCN3AQ9NY46 2000 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 NPIPB8E9PQR5 432 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 DYNC1I1O14576 645 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 KLF11O14901 512 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 PCDH17O14917 1159 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 SNNO75324 88 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 CDC123O75794 336 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 TPP2P29144 1249 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 RHAGQ02094 409 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 COL28A1Q2UY09 1125 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 C1orf52Q8N6N3 182 aaKnown RBP20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 ZNF781Q8N8C0 355 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 TWIST2Q8WVJ9 160 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 CATSPER2Q96P56 530 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 IP6K3Q96PC2 410 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 CSF3RQ99062 836 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 ILKAPQ9H0C8 392 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 MANSC1Q9H8J5 431 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 MED4Q9NPJ6 270 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 THAP1Q9NVV9 213 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 ASB4Q9Y574 426 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 PTGDR2Q9Y5Y4 395 aa20.19■□□□□ 0.82
SDR39U1-208ENST00000554698 OR2W5A6NFC9 320 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 SOCS6O14544 535 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 B4GALT2O60909 372 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 RSL1D1O76021 490 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 KLK1P06870 262 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 FAM58BPP0C7Q3 252 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 NR1D1P20393 614 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 SPIN4Q56A73 249 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 MFSD4BQ5TF39 518 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 ATG16L1Q676U5 607 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 TMEM205Q6UW68 189 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 QSOX2Q6ZRP7 698 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 GPR180Q86V85 440 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 KIRREL3Q8IZU9 778 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 FAM47BQ8NA70 645 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 PLPP5Q8NEB5 264 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 APIPQ96GX9 242 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 LYARQ9NX58 379 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 SIRT5Q9NXA8 310 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 MS4A12Q9NXJ0 267 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 PHF11Q9UIL8 331 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 POLHQ9Y253 713 aa20.18■□□□□ 0.82
SDR39U1-208ENST00000554698 A0A1W2PQ72 361 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 SLC28A1O00337 649 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 ALOX12BO75342 701 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 GBAP04062 536 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 PRPH2P23942 346 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 HNRNPFP52597 415 aaKnown RBP20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 HNRNPH2P55795 449 aaKnown RBP20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 ACSM2AQ08AH3 577 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 ATP1A4Q13733 1029 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 IMPG1Q17R60 797 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 HSP90B2PQ58FF3 399 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 CCNYL2Q5T2Q4 361 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 ACSM2BQ68CK6 577 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 GALNT18Q6P9A2 607 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 CYP20A1Q6UW02 462 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 KIRREL2Q6UWL6 708 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 Q6ZSR9 355 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 GPR155Q7Z3F1 870 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 ZNF595Q8IYB9 648 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 TMEM52Q8NDY8 209 aa20.17■□□□□ 0.82
SDR39U1-208ENST00000554698 ZNF75CPQ92670 426 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms