RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TUBA3CQ13748 450 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 SETDB1Q15047 1291 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 PCBP2Q15366 365 aaKnown RBP eCLIP8.17□□□□□ -1.11e-6■■■□□ 16.6
ACTN1-213ENST00000554508 TMEM35AQ53FP2 167 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 ZNF766Q5HY98 468 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 LGSNQ5TDP6 509 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 LIPJQ5W064 366 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 ZNF324BQ6AW86 544 aaPredicted RBP8.17□□□□□ -1.1
ACTN1-213ENST00000554508 TUBA3EQ6PEY2 450 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 TAOK1Q7L7X3 1001 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 SCUBE1Q8IWY4 988 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 BEST3Q8N1M1 668 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 TEX9Q8N6V9 391 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 AMER2Q8N7J2 671 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 TMEM178AQ8NBL3 297 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 NFAM1Q8NET5 270 aaPredicted RBP8.17□□□□□ -1.1
ACTN1-213ENST00000554508 ZNF473Q8WTR7 871 aaKnown RBP8.17□□□□□ -1.1
ACTN1-213ENST00000554508 NR4A3Q92570 626 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 CMTM7Q96FZ5 175 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 C5orf34Q96MH7 638 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 F2RL3Q96RI0 385 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 TAAR6Q96RI8 345 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 NPAS2Q99743 824 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 MS4A8Q9BY19 250 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 DEFB126Q9BYW3 111 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 EPB41L4BQ9H329 900 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 CDCP1Q9H5V8 836 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 LYRM4Q9HD34 91 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 NECTIN3Q9NQS3 549 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 PRDM7Q9NQW5 492 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 ERRFI1Q9UJM3 462 aaPredicted RBP8.17□□□□□ -1.1
ACTN1-213ENST00000554508 TMCO1Q9UM00 188 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 DAPP1Q9UN19 280 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 TSC22D4Q9Y3Q8 395 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 ASB1Q9Y576 335 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 ANGPTL3Q9Y5C1 460 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 TNPO3Q9Y5L0 923 aaKnown RBP8.17□□□□□ -1.1
ACTN1-213ENST00000554508 SPACA6W5XKT8 324 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 EML6Q6ZMW3 1958 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 CROCCQ5TZA2 2017 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 SMIM23A6NLE4 172 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 GABRR3A8MPY1 467 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CYR61O00622 381 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 UGDHO60701 494 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CTNSO60931 367 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 KRT38O76015 456 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 MLYCDO95822 493 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 ALDOAP04075 364 aaKnown RBP8.16□□□□□ -1.1
ACTN1-213ENST00000554508 RBP1P09455 135 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 COL6A2P12110 1019 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 GFAPP14136 432 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CD46P15529 392 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CERS1P27544 350 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CD96P40200 585 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PIK3CBP42338 1070 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PIK3CGP48736 1102 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CLCN2P51788 898 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 TDGF1P3P51864 188 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 ARFIP1P53367 373 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PER3P56645 1201 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 MLF1P58340 268 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PHEXP78562 749 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CACNA1DQ01668 2161 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 IFFO1Q0D2I5 559 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 SLC13A2Q13183 592 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 BIKQ13323 160 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 OR1C1Q15619 314 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PFKFB4Q16877 469 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 TSNAXIP1Q2TAA8 658 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 AP5B1Q2VPB7 878 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 DOPEY1Q5JWR5 2465 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 DEPDC1Q5TB30 811 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 FCRLBQ6BAA4 426 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 ADNP2Q6IQ32 1131 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 GRHL2Q6ISB3 625 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CNPY4Q8N129 248 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 ARMC10Q8N2F6 343 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 TMEM132CQ8N3T6 1108 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 ACOT4Q8N9L9 421 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 MDS2Q8NDY4 140 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 B3GNT7Q8NFL0 401 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 MYRIPQ8NFW9 859 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 OR7G3Q8NG95 312 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 DCAKDQ8WVC6 231 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 ISL2Q96A47 359 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 REPS1Q96D71 796 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 SCMH1Q96GD3 660 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 GPR78Q96P69 363 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PCNX1Q96RV3 2341 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 CENPKQ9BS16 269 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 VPS11Q9H270 941 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 TRIM45Q9H8W5 580 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PRM3Q9NNZ6 103 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 ADAP2Q9NPF8 381 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PNO1Q9NRX1 252 aaKnown RBP8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PSD3Q9NYI0 1048 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 KCMF1Q9P0J7 381 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PLEKHB1Q9UF11 243 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-213ENST00000554508 TBK1Q9UHD2 729 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms