RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RAB8AP61006 207 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 KCNJ2P63252 427 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 CRYZQ08257 329 aaKnown RBP12.69□□□□□ -0.38
PRPF39-204ENST00000553605 PHKG1Q16816 387 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 CHRFAM7AQ494W8 412 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 PCID2Q5JVF3 399 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 SLC22A10Q63ZE4 541 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 SCUBE1Q8IWY4 988 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.69□□□□□ -0.38
PRPF39-204ENST00000553605 CA13Q8N1Q1 262 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 TMEM132CQ8N3T6 1108 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 MEIOBQ8N635 442 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 PRELID2Q8N945 189 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 MBD3L2Q8NHZ7 208 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-204ENST00000553605 NT5CQ8TCD5 201 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 ALKBH8Q96BT7 664 aaKnown RBP12.69□□□□□ -0.38
PRPF39-204ENST00000553605 SLC30A3Q99726 388 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 NHEJ1Q9H9Q4 299 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-204ENST00000553605 ETNK1Q9HBU6 452 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 YAE1D1Q9NRH1 226 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 TREX1Q9NSU2 369 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 ZNF148Q9UQR1 794 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
PRPF39-204ENST00000553605 DSCAMO60469 2012 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 A0A087X1B8 175 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 DEFB108AA8MXU0 73 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 E7EVH7 732 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 PFDN6O15212 129 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 CTIFO43310 598 aaKnown RBP12.68□□□□□ -0.38
PRPF39-204ENST00000553605 MPC1LP0DKB6 136 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 CTNNA1P35221 906 aaKnown RBP12.68□□□□□ -0.38
PRPF39-204ENST00000553605 CETN2P41208 172 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 HNF4AP41235 474 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 CLCN7P51798 805 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 NR1H2P55055 460 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 IQCB1Q15051 598 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 KRTAP24-1Q3LI83 254 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 TTLL9Q3SXZ7 439 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 MRNIPQ6NTE8 343 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 AADACL2Q6P093 401 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 CYHR1Q6ZMK1 362 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 UBE2R2Q712K3 238 aaPredicted RBP12.68□□□□□ -0.38
PRPF39-204ENST00000553605 PIK3IP1Q96FE7 263 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 DNAJC7Q99615 494 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 PRDM14Q9GZV8 571 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 ADAP2Q9NPF8 381 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 PRTFDC1Q9NRG1 225 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 CAMK2AQ9UQM7 478 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 CLDN16Q9Y5I7 305 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 CLCA3PQ9Y6N3 262 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 NCKAP5O14513 1909 aa12.68□□□□□ -0.38
PRPF39-204ENST00000553605 TRBC2A0A5B9 178 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 URADA6NGE7 173 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 LRRC3CA6NJW4 275 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 RNF223E7ERA6 249 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 TGFBR3LH3BV60 316 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 SOX30O94993 753 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 TMIGD3P0DMS9 266 aaPredicted RBP12.67□□□□□ -0.38
PRPF39-204ENST00000553605 SMIM10L1P0DMW3 83 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 PAX1P15863 534 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 NPPBP16860 134 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 NMBRP28336 390 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 CCR8P51685 355 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 HSD17B7P56937 341 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 RNF4P78317 190 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 FOXF2Q12947 444 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 SLC13A2Q13183 592 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 CUL1Q13616 776 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 ELAVL1Q15717 326 aaKnown RBP12.67□□□□□ -0.38
PRPF39-204ENST00000553605 BBS9Q3SYG4 887 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 C11orf63Q6NUN7 778 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 LCTLQ6UWM7 567 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 SYDE1Q6ZW31 735 aaPredicted RBP12.67□□□□□ -0.38
PRPF39-204ENST00000553605 STRA8Q7Z7C7 330 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 TBC1D19Q8N5T2 526 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 ABHD11Q8NFV4 315 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 OR4K1Q8NGD4 311 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 OR5L2Q8NGL0 311 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 OR8K3Q8NH51 312 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 NTNG2Q96CW9 530 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 SMIM10Q96HG1 83 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
PRPF39-204ENST00000553605 TCF12Q99081 682 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 CALHM2Q9HA72 323 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 SH2D2AQ9NP31 389 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 ZFP69BQ9UJL9 534 aa12.67□□□□□ -0.38
PRPF39-204ENST00000553605 GOLGA8KD6RF30 607 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 GOLGA8TH3BQL2 631 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 CD5LO43866 347 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 VAPBO95292 243 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 IFNA16P05015 189 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 CCND1P24385 295 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 GDF1P27539 372 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 FDFT1P37268 417 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 MC3RP41968 323 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 CRADDP78560 199 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 RUNX1T1Q06455 604 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 TBL3Q12788 808 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms