RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ING5Q8WYH8 240 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 OR5P2Q8WZ92 322 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 TAMM41Q96BW9 452 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 PDXPQ96GD0 296 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 SH3YL1Q96HL8 342 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 LRRC3BQ96PB8 259 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 FAM129BQ96TA1 746 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 PIP5K1AQ99755 562 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 EXD2Q9NVH0 621 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 PSORS1C1Q9UIG5 152 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 ADAM29Q9UKF5 820 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 COQ6Q9Y2Z9 468 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 FAM32AQ9Y421 112 aaKnown RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 OR2A25A4D2G3 310 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 CLCA1A8K7I4 914 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 MMP20O60882 483 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 COQ9O75208 318 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 KLK1P06870 262 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 AQP1P29972 269 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 LTBRP36941 435 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 RANBP1P43487 201 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 XCR1P46094 333 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 LIMS1P48059 325 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 DSTNP60981 165 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 TSTA3Q13630 321 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 NFE2L1Q14494 772 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 ZNF234Q14588 700 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 AGERQ15109 404 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 PDGFRLQ15198 375 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 MPEG1Q2M385 716 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 COX20Q5RI15 118 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 KHDRBS2Q5VWX1 349 aaKnown RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 REEP3Q6NUK4 255 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 TMEM184AQ6ZMB5 413 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 DCDC5Q6ZRR9 648 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 TRIM74Q86UV6 250 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 LRRTM4Q86VH4 590 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 CCDC71Q8IV32 467 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 RAB42Q8N4Z0 105 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 RHOXF1Q8NHV9 184 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 NFKBIDQ8NI38 313 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 APH1BQ8WW43 257 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 TFGQ92734 400 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-205ENST00000553474 NEURL3Q96EH8 262 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 MAPKAP1Q9BPZ7 522 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 COPS4Q9BT78 406 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 ITPAQ9BY32 194 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 FKBP14Q9NWM8 211 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 SH2B3Q9UQQ2 575 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 HCN4Q9Y3Q4 1203 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 ENPP4Q9Y6X5 453 aa12.33□□□□□ -0.44
SHMT2-205ENST00000553474 SH3D21A4FU49 640 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 CAPN5O15484 640 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-205ENST00000553474 SH3BGRLO75368 114 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 KLHL18O94889 574 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 IL3P08700 152 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 PSMB9P28065 219 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 TPP2P29144 1249 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-205ENST00000553474 EPHA2P29317 976 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 MASP1P48740 699 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 TRA2BP62995 288 aaKnown RBP12.32□□□□□ -0.44
SHMT2-205ENST00000553474 OLR1P78380 273 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 SPIBQ01892 262 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 NR1D2Q14995 579 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 MLC1Q15049 377 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 METRNLQ641Q3 311 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 GET4Q7L5D6 327 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-205ENST00000553474 ZNF605Q86T29 641 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 SLCO6A1Q86UG4 719 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 RNF130Q86XS8 419 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 LGI4Q8N135 537 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 WDR48Q8TAF3 677 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 SUSD6Q92537 303 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 CIDECQ96AQ7 238 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-205ENST00000553474 SLC6A16Q9GZN6 736 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 UBE2ZQ9H832 354 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-205ENST00000553474 A4GALTQ9NPC4 353 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 RASSF1Q9NS23 344 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 ZSCAN32Q9NX65 697 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 GIN1Q9NXP7 522 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 TAAR2Q9P1P5 351 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 KCND3Q9UK17 655 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 RNF6Q9Y252 685 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 TESMINQ9Y4I5 508 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 A3GALT2U3KPV4 340 aa12.32□□□□□ -0.44
SHMT2-205ENST00000553474 DOCK8Q8NF50 2099 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 C5orf42Q9H799 3197 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 NUMA1Q14980 2115 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 FOXD2O60548 495 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-205ENST00000553474 SULT1C4O75897 302 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 FADS2O95864 444 aaKnown RBP12.31□□□□□ -0.44
SHMT2-205ENST00000553474 IFNW1P05000 195 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 UGT2B10P36537 528 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 FRKP42685 505 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-205ENST00000553474 CCR8P51685 355 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 MAPK12P53778 367 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 MAPK10P53779 464 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 MC1RQ01726 317 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 GAB4Q2WGN9 574 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms