RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 HK2P52789 917 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 BTN3A2P78410 334 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 FOXO1Q12778 655 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 SLC13A2Q13183 592 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 RBBP5Q15291 538 aaKnown RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 WLSQ5T9L3 541 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 PAMR1Q6UXH9 720 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 RTL4Q6ZR62 310 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 LMNTD2Q8IXW0 634 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 RNF10Q8N5U6 811 aaKnown RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ZNF321PQ8N8H1 164 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 RELL2Q8NC24 303 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 C2CD4AQ8NCU7 369 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 TRPV3Q8NET8 790 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 GOT1L1Q8NHS2 421 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 FBXL8Q96CD0 374 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 MBD6Q96DN6 1003 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 SERPINB12Q96P63 405 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 FAM167BQ9BTA0 163 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 IL1RL2Q9HB29 575 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ADAP2Q9NPF8 381 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 SEMA4BQ9NPR2 832 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 TRMT1Q9NXH9 659 aaKnown RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ALKBH4Q9NXW9 302 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 TUBA8Q9NY65 449 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-209ENST00000553308 TAS2R13Q9NYV9 303 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 SPRR3Q9UBC9 169 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 IKZF3Q9UKT9 509 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ACAD8Q9UKU7 415 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 CBLCQ9ULV8 474 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 ZKSCAN5Q9Y2L8 839 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 MAD1L1Q9Y6D9 718 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 EML6Q6ZMW3 1958 aa8.41□□□□□ -1.06
SYNE2-209ENST00000553308 TRGV5A0A0B4J1U4 118 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 MAGEB16A2A368 324 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 PABPN1LA6NDY0 278 aaKnown RBP8.4□□□□□ -1.06
SYNE2-209ENST00000553308 SUSD5O60279 629 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 RAF1P04049 648 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 SERPINA6P08185 405 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 SAT1P21673 171 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 GABRB3P28472 473 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 HNRNPH1P31943 449 aaKnown RBP8.4□□□□□ -1.06
SYNE2-209ENST00000553308 MAGEA3P43357 314 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 AP1S2P56377 157 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 HSD17B7P56937 341 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 RAB38P57729 211 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 CCZ1BP86790 482 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 CCZ1P86791 482 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-209ENST00000553308 BMPR2Q13873 1038 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 ELAVL1Q15717 326 aaKnown RBP8.4□□□□□ -1.06
SYNE2-209ENST00000553308 DEFB113Q30KQ7 82 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 FLYWCH1Q4VC44 716 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 RIPPLY2Q5TAB7 128 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 NXPE4Q6UWF7 544 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 HSDL2Q6YN16 418 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 FAM47EQ6ZV65 393 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 SEM1Q6ZVN7 128 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 CAMKMTQ7Z624 323 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 BIVMQ86UB2 503 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 NAXEQ8NCW5 288 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 MCUQ8NE86 351 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 GAL3ST3Q96A11 431 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 SARAFQ96BY9 339 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 CSF3RQ99062 836 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 SH3GL2Q99962 352 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 AIF1LQ9BQI0 150 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 LDAHQ9H6V9 325 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 EXO5Q9H790 373 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 PELI2Q9HAT8 420 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 XAB2Q9HCS7 855 aaKnown RBP8.4□□□□□ -1.06
SYNE2-209ENST00000553308 SACM1LQ9NTJ5 587 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 SLC17A6Q9P2U8 582 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 B4GALT7Q9UBV7 327 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 DYRK1BQ9Y463 629 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 ATG4BQ9Y4P1 393 aa8.4□□□□□ -1.06
SYNE2-209ENST00000553308 NIPBLQ6KC79 2804 aaeCLIP8.39□□□□□ -1.07
SYNE2-209ENST00000553308 KDM4EB2RXH2 506 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-209ENST00000553308 SYT5O00445 386 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 CLDN4O14493 209 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 ERI3O43414 337 aaKnown RBP8.39□□□□□ -1.07
SYNE2-209ENST00000553308 ATE1O95260 518 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 KRT14P02533 472 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 P04436 131 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 IFNA16P05015 189 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 BMP5P22003 454 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 TACR1P25103 407 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 PIGAP37287 484 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 WNT3P56703 355 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 IL2P60568 153 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 STXBP1P61764 594 aaKnown RBP8.39□□□□□ -1.07
SYNE2-209ENST00000553308 PDAP1Q13442 181 aaKnown RBP8.39□□□□□ -1.07
SYNE2-209ENST00000553308 CRYMQ14894 314 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 SLC10A1Q14973 349 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 HYAL4Q2M3T9 481 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 TMEM198Q66K66 360 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 TTC27Q6P3X3 843 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 SBSNQ6UWP8 590 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 THOC6Q86W42 341 aaKnown RBP8.39□□□□□ -1.07
SYNE2-209ENST00000553308 KRTAP1-3Q8IUG1 177 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms