RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 DAPP1Q9UN19 280 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 G3BP2Q9UN86 482 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 MRPS33Q9Y291 106 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 MMACHCQ9Y4U1 282 aa11.03□□□□□ -0.64
TRAFD1-209ENST00000552896 CNTRLQ7Z7A1 2325 aa11.02□□□□□ -0.64
TRAFD1-209ENST00000552896 IGKV3D-11A0A0A0MRZ8 115 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 NSG1A0A0A6YYJ2 146 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 BLACEA4D250 179 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 GOLGA6L10A6NI86 522 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 SAP18O00422 153 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 RTCAO00442 366 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 MANBAO00462 879 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 TM9SF1O15321 606 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 KLHL41O60662 606 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 TRIM13O60858 407 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 DNAJB6O75190 326 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 SH3BGRLO75368 114 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 ETHE1O95571 254 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 PDYNP01213 254 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 CREB1P16220 341 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 HMOX2P30519 316 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 ETV4P43268 484 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 NEK2P51955 445 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 AP2B1P63010 937 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 RUNX2Q13950 521 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 CASP8Q14790 479 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 PCOLCEQ15113 449 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 LACTB2Q53H82 288 aaPredicted RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 SOWAHCQ53LP3 525 aaPredicted RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 FAAH2Q6GMR7 532 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 TCTN3Q6NUS6 607 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 LANCL3Q6ZV70 420 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 NDUFAF7Q7L592 441 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 ANKRD37Q7Z713 158 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 EXOC3L1Q86VI1 746 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 ZNF595Q8IYB9 648 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 GALNT16Q8N428 558 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 FAM47BQ8NA70 645 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 SELENOMQ8WWX9 145 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 SREK1Q8WXA9 508 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 TUBB6Q9BUF5 446 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 SLC25A18Q9H1K4 315 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 DDX31Q9H8H2 851 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 ATP13A2Q9NQ11 1180 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 PRDM9Q9NQV7 894 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 FARSBQ9NSD9 589 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 LYARQ9NX58 379 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 GPR83Q9NYM4 423 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 PHF11Q9UIL8 331 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 RALYQ9UKM9 306 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 PCDHGB7Q9Y5F8 929 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 SPACA6W5XKT8 324 aa11.02□□□□□ -0.65
TRAFD1-209ENST00000552896 A0A0A6YYD5 115 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 TCRBV16S1A1N1A0A5B0 115 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 CYR61O00622 381 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 UBFD1O14562 309 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 PRMT3O60678 531 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 B4GALT2O60909 372 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 ZWINTO95229 277 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 ALDH3A1P30838 453 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 BSGP35613 385 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 SERPINB5P36952 375 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 PGDP52209 483 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 HSD17B7P56937 341 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 MYBPC3Q14896 1274 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 NSDHLQ15738 373 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 TCHHL1Q5QJ38 904 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 VWA5B1Q5TIE3 1220 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 RIPOR1Q6ZS17 1223 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 PAGE2Q7Z2X7 111 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 CPEB2Q7Z5Q1 589 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 GBP7Q8N8V2 638 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 METTL6Q8TCB7 284 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 TSLPQ969D9 159 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 ABHD17AQ96GS6 310 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 CNDP1Q96KN2 507 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 CSF3RQ99062 836 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 MAPKAP1Q9BPZ7 522 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 SLC25A23Q9BV35 468 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 MECRQ9BV79 373 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 GATA5Q9BWX5 397 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 SORBS1Q9BX66 1292 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 SEMA4CQ9C0C4 833 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 ZNF160Q9HCG1 818 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 MLXIPLQ9NP71 852 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 NMRK1Q9NWW6 199 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 MS4A12Q9NXJ0 267 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 KCMF1Q9P0J7 381 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 ADAM29Q9UKF5 820 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 SLC12A4Q9UP95 1085 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 TP53TG5Q9Y2B4 290 aa11.01□□□□□ -0.65
TRAFD1-209ENST00000552896 PRRC2CQ9Y520 2896 aaKnown RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 EXPH5Q8NEV8 1989 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 SERTM1A2A2V5 107 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 OR2W5A6NFC9 320 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 FAM227AF5H4B4 570 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 CLDN4O14493 209 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 NPHS1O60500 1241 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 ULK1O75385 1050 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms