RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 SERPINB8P50452 374 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 TLE4Q04727 773 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 CSHL1Q14406 222 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 TSNQ15631 228 aaKnown RBP11.07□□□□□ -0.64
CKAP4-202ENST00000552828 WDR93Q6P2C0 686 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 FRA10AC1Q70Z53 315 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 CDH24Q86UP0 819 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 C16orf52Q8NHV5 167 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 FAM57AQ8TBR7 257 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 UTP15Q8TED0 518 aaKnown RBP11.07□□□□□ -0.64
CKAP4-202ENST00000552828 CA5BP1Q8WTZ4 195 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 CHTF18Q8WVB6 975 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 DCAKDQ8WVC6 231 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 UBLCP1Q8WVY7 318 aaPredicted RBP11.07□□□□□ -0.64
CKAP4-202ENST00000552828 TMEM125Q96AQ2 219 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 FBXL8Q96CD0 374 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 PTCHD1Q96NR3 888 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 OR4K3Q96R72 315 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 NMRAL1Q9HBL8 299 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 SNX15Q9NRS6 342 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.07□□□□□ -0.644e-7■■□□□ 14
CKAP4-202ENST00000552828 ZFP69BQ9UJL9 534 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 PPT2Q9UMR5 302 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 OARD1Q9Y530 152 aa11.07□□□□□ -0.64
CKAP4-202ENST00000552828 V9GYY5 206 aaPredicted RBP11.07□□□□□ -0.64
CKAP4-202ENST00000552828 MAP1AP78559 2803 aaPredicted RBP11.06□□□□□ -0.64
CKAP4-202ENST00000552828 A0A096LPK6 155 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 B4GALT2O60909 372 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 C2P06681 752 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 SNRPAP09012 282 aaKnown RBP11.06□□□□□ -0.64
CKAP4-202ENST00000552828 LTA4HP09960 611 aaKnown RBP11.06□□□□□ -0.64
CKAP4-202ENST00000552828 SMIM10L1P0DMW3 83 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 PTGS2P35354 604 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 AHRP35869 848 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 SCTRP47872 440 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 HNMTP50135 292 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 VSNL1P62760 191 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 BTG2P78543 158 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 CDKL1Q00532 357 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 RGS1Q08116 209 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 TERF2Q15554 542 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 PPP1R3AQ16821 1122 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 FAM83EQ2M2I3 478 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 ERCC6LQ2NKX8 1250 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 CMPK2Q5EBM0 449 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 C3P1Q6ZMU1 363 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 MEX3BQ6ZN04 569 aaKnown RBP11.06□□□□□ -0.64
CKAP4-202ENST00000552828 ABHD13Q7L211 337 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 GPSM1Q86YR5 675 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 SULF2Q8IWU5 870 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 CNPY4Q8N129 248 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 MARVELD2Q8N4S9 558 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 TBC1D19Q8N5T2 526 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 APCDD1LQ8NCL9 501 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 STAG3L4Q8TBR4 150 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 KIAA1191Q96A73 305 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 ALKBH8Q96BT7 664 aaKnown RBP11.06□□□□□ -0.64
CKAP4-202ENST00000552828 PYCR2Q96C36 320 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 SDCCAG3Q96C92 435 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 SMIM10Q96HG1 83 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 EGFL8Q99944 293 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 DEFB126Q9BYW3 111 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 SLC6A16Q9GZN6 736 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 EPB41L4BQ9H329 900 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 PRDM9Q9NQV7 894 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 PLSCR2Q9NRY7 297 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 COQ3Q9NZJ6 369 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 FETUBQ9UGM5 382 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 PPIEQ9UNP9 301 aaKnown RBP11.06□□□□□ -0.64
CKAP4-202ENST00000552828 KLF13Q9Y2Y9 288 aaPredicted RBP11.06□□□□□ -0.64
CKAP4-202ENST00000552828 HRH3Q9Y5N1 445 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 NIPBLQ6KC79 2804 aaeCLIP11.06□□□□□ -0.64
CKAP4-202ENST00000552828 SPG11Q96JI7 2443 aa11.06□□□□□ -0.64
CKAP4-202ENST00000552828 CACNA1CQ13936 2221 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 ITPR3Q14573 2671 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 A0A1B0GTH9 108 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 TRIM49D1C9J1S8 452 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 KLRC4-KLRK1H3BQV0 150 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 FCHO1O14526 889 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 B3GALT4O96024 378 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 ALDOAP04075 364 aaKnown RBP11.05□□□□□ -0.64
CKAP4-202ENST00000552828 TUBBP07437 444 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 ZNF888P0CJ79 500 aaPredicted RBP11.05□□□□□ -0.64
CKAP4-202ENST00000552828 MAOAP21397 527 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 MEOX1P50221 254 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 OLR1P78380 273 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 TFF3Q07654 80 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 HYAL2Q12891 473 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 TGFBIQ15582 683 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 KRTAP21-3Q3LHN1 58 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 CDKL4Q5MAI5 379 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 CATSPEREQ5SY80 951 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 EMBQ6PCB8 327 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 ADGRD1Q6QNK2 874 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 ISCA2Q86U28 154 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 ZFP62Q8NB50 900 aaPredicted RBP11.05□□□□□ -0.64
CKAP4-202ENST00000552828 LILRB4Q8NHJ6 448 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 SLC5A11Q8WWX8 675 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 NEIL2Q969S2 332 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 MTBPQ96DY7 904 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms