RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	STON1	Q9Y6Q2	735 aa		11.29	□□□□□ -0.6
LETMD1-223	ENST00000550442	COLEC10	Q9Y6Z7	277 aa		11.29	□□□□□ -0.6
LETMD1-223	ENST00000550442	SMG1	Q96Q15	3661 aa	Known RBP	11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442		A0A1W2PRB8	838 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442		H3BSA7	217 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	HS6ST1	O60243	411 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	TNFRSF21	O75509	655 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	SEC14L2	O76054	403 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	CPSF4	O95639	269 aa	Known RBP	11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	ZNF682	O95780	498 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	GNAO1	P09471	354 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	ITIH1	P19827	911 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	FCAR	P24071	287 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	AHR	P35869	848 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	IL12RB1	P42701	662 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	RAB28	P51157	221 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	REEP5	Q00765	189 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	KCNC4	Q03721	635 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	RELA	Q04206	551 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	CNTN1	Q12860	1018 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	DDX39B	Q13838	428 aa	Known RBP	11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	PROX2	Q3B8N5	592 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	IFI44L	Q53G44	452 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	PRAMEF8	Q5VWM4	474 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	PRAMEF7	Q5VXH5	474 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	KIAA1614	Q5VZ46	1190 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	FAHD1	Q6P587	224 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	USP30	Q70CQ3	517 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	HEATR4	Q86WZ0	1026 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	PHACTR4	Q8IZ21	702 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	DEPDC4	Q8N2C3	294 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	SPEM1	Q8N4L4	309 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	GEMIN6	Q8WXD5	167 aa	Known RBP	11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	FAM3C	Q92520	227 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	SH3KBP1	Q96B97	665 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	SLC22A18	Q96BI1	424 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	PPP1R14B	Q96C90	147 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	NMD3	Q96D46	503 aa	Known RBP	11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	RSPRY1	Q96DX4	576 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	SCARF2	Q96GP6	870 aa	Predicted RBP	11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	MPP4	Q96JB8	637 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	PALMD	Q9NP74	551 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	TMEM184C	Q9NVA4	438 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	SPAST	Q9UBP0	616 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	SLC17A4	Q9Y2C5	497 aa		11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.28	□□□□□ -0.6
LETMD1-223	ENST00000550442	DMXL2	Q8TDJ6	3036 aa		11.27	□□□□□ -0.6
LETMD1-223	ENST00000550442	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.27	□□□□□ -0.6
LETMD1-223	ENST00000550442	WDFY3	Q8IZQ1	3526 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	MUC22	E2RYF6	1773 aa	Predicted RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	TRBC2	A0A5B9	178 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	BCKDK	O14874	412 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	SOX30	O94993	753 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	LRAT	O95237	230 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	GSN	P06396	782 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	EEF1B2	P24534	225 aa	Known RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	FRK	P42685	505 aa	Predicted RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	CDKN2C	P42773	168 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	PRDX1	Q06830	199 aa	Known RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	KCNAB2	Q13303	367 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	DCTN2	Q13561	401 aa	Known RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	TBPL2	Q6SJ96	375 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	VIT	Q6UXI7	678 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	KCTD8	Q6ZWB6	473 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	ARMCX6	Q7L4S7	300 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	ANKRD46	Q86W74	232 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	NUDT13	Q86X67	352 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	ZNF687	Q8N1G0	1237 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	OR13F1	Q8NGS4	319 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	OR2L8	Q8NGY9	312 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	NEURL3	Q96EH8	262 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	MSANTD3	Q96H12	275 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	C7orf34	Q96L11	122 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	PITX2	Q99697	317 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	TRMT61B	Q9BVS5	477 aa	Known RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	EBPL	Q9BY08	206 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	MS4A8	Q9BY19	250 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	GABARAPL3	Q9BY60	117 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	TRIM8	Q9BZR9	551 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	ROGDI	Q9GZN7	287 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	RUBCNL	Q9H714	662 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	DDX31	Q9H8H2	851 aa	Known RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	POLR1B	Q9H9Y6	1135 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	ZNF556	Q9HAH1	456 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	PRM3	Q9NNZ6	103 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	C1GALT1	Q9NS00	363 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	PLCXD1	Q9NUJ7	323 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	NDRG4	Q9ULP0	352 aa	Known RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	NCKAP1	Q9Y2A7	1128 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	POFUT2	Q9Y2G5	429 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	FAM32A	Q9Y421	112 aa	Known RBP	11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	PCDHGA5	Q9Y5G8	931 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	AKAP13	Q12802	2813 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	MYOF	Q9NZM1	2061 aa		11.27	□□□□□ -0.61
LETMD1-223	ENST00000550442	IGSF10	Q6WRI0	2623 aa		11.26	□□□□□ -0.61
LETMD1-223	ENST00000550442	SHISA7	A6NL88	538 aa		11.26	□□□□□ -0.61
LETMD1-223	ENST00000550442	TNFRSF10C	O14798	259 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms