RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 C19orf60Q96EN9 201 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 FCRL1Q96LA6 429 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 PPP1R36Q96LQ0 422 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 MESP1Q9BRJ9 268 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 CENPKQ9BS16 269 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 RBCK1Q9BYM8 510 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 NUF2Q9BZD4 464 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 ROGDIQ9GZN7 287 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 ACTL8Q9H568 366 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 CCDC134Q9H6E4 229 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 SOX17Q9H6I2 414 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-206ENST00000550406 WDR54Q9H977 334 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 COPS7BQ9H9Q2 264 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-206ENST00000550406 GPN2Q9H9Y4 310 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-206ENST00000550406 LYRM4Q9HD34 91 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 NMRK1Q9NWW6 199 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 C1orf109Q9NX04 203 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 GPN3Q9UHW5 284 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-206ENST00000550406 FBXW2Q9UKT8 454 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 PTRH2Q9Y3E5 179 aaKnown RBP12.3□□□□□ -0.44
RAB5C-206ENST00000550406 ATG4BQ9Y4P1 393 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 CLDN16Q9Y5I7 305 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 CEP295Q9C0D2 2601 aa12.3□□□□□ -0.44
RAB5C-206ENST00000550406 A0A088AWK7 358 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 A0A1W2PR48 441 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 TMEM8BA6NDV4 472 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 WASHC1A8K0Z3 465 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 TGFBR3LH3BV60 316 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 PROM1O43490 865 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 RGS14O43566 566 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 EDF1O60869 148 aaKnown RBP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 SEC22BO75396 215 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 PRKRAO75569 313 aaKnown RBP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 FHP07954 510 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 FURINP09958 794 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 FAM58BPP0C7Q3 252 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 PRR35P0CG20 571 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 RNH1P13489 461 aaKnown RBP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 ZNF10P21506 573 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 TIA1P31483 386 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 HK2P52789 917 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 RPS15P62841 145 aaKnown RBP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 SKP1P63208 163 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 BTG2P78543 158 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 RHAGQ02094 409 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 OCA2Q04671 838 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 IL10RAQ13651 578 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 NR6A1Q15406 480 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 IMPG1Q17R60 797 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 SPIN4Q56A73 249 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 CCNYL2Q5T2Q4 361 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 ACSM2BQ68CK6 577 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 GALNT18Q6P9A2 607 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 FAM47EQ6ZV65 393 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 CRLF3Q8IUI8 442 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 HOMEZQ8IX15 550 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 OR2Y1Q8NGV0 311 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 PIWIL2Q8TC59 973 aaKnown RBP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 TBC1D20Q96BZ9 403 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 MIEF2Q96C03 454 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 CCNL2Q96S94 520 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-206ENST00000550406 EBPLQ9BY08 206 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 AKTIPQ9H8T0 292 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 MEAF6Q9HAF1 191 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 LRTM1Q9HBL6 345 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 MCM8Q9UJA3 840 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 DLGAP4Q9Y2H0 992 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 ACACAQ13085 2346 aa12.29□□□□□ -0.44
RAB5C-206ENST00000550406 A0A087WV48 116 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 HDAC3O15379 428 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 PCDH7O60245 1069 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 B4GALT2O60909 372 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 PEX11AO75192 247 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 CREG1O75629 220 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 CDC123O75794 336 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-206ENST00000550406 IL10P22301 178 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 TACR1P25103 407 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 TLE3Q04726 772 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 TUBB8Q3ZCM7 444 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 GALNTL6Q49A17 601 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 SLC9B1Q4ZJI4 515 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 C6orf136Q5SQH8 315 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 NOXRED1Q6NXP6 359 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 CYP20A1Q6UW02 462 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 LARP4Q71RC2 724 aaKnown RBP eCLIP12.28□□□□□ -0.44
RAB5C-206ENST00000550406 PAGE2Q7Z2X7 111 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 GPR180Q86V85 440 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 KIRREL3Q8IZU9 778 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 MMP21Q8N119 569 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 AMER2Q8N7J2 671 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 FAM47BQ8NA70 645 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 PLPP5Q8NEB5 264 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 ADAMTS17Q8TE56 1095 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 C16orf78Q8WTQ4 265 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 METTL2AQ96IZ6 378 aaKnown RBP12.28□□□□□ -0.44
RAB5C-206ENST00000550406 SLC45A3Q96JT2 553 aa12.28□□□□□ -0.44
RAB5C-206ENST00000550406 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms