RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 REPS1Q96D71 796 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 PHOX2BQ99453 314 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 NIPSNAP1Q9BPW8 284 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 KCNS3Q9BQ31 491 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 ASPNQ9BXN1 380 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 SLC22A4Q9H015 551 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 ABCG8Q9H221 673 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 AMBNQ9NP70 447 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 FTSJ1Q9UET6 329 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 SNX7Q9UNH6 387 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 CFAP20Q9Y6A4 193 aaKnown RBP12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
SMPDL3B-206ENST00000549094 FADS2P1A8MWK0 482 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 QSOX1O00391 747 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 TNFRSF21O75509 655 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 GADD45GO95257 159 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 YES1P07947 543 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 NUDT7P0C024 238 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 AQP1P29972 269 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 TIA1P31483 386 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 CRATP43155 626 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 XCR1P46094 333 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 HMGA2P52926 109 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 PFN3P60673 137 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 CYP4F2P78329 520 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 SCN1BQ07699 218 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 HSPA14Q0VDF9 509 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 C1DQ13901 141 aaKnown RBP12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 RNLSQ5VYX0 342 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 SPATC1Q76KD6 591 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 TSEN54Q7Z6J9 526 aaKnown RBP12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 GALNT12Q8IXK2 581 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 TCEAL8Q8IYN2 117 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 TAGAPQ8N103 731 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 FAM181AQ8N9Y4 354 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 GPR26Q8NDV2 337 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 KIAA1143Q96AT1 154 aaPredicted RBP12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 ALG14Q96F25 216 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 VPS35Q96QK1 796 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 MND1Q9BWT6 205 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 ROGDIQ9GZN7 287 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 MIR1-1HGQ9H1L0 117 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 RNF167Q9H6Y7 350 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 GKN1Q9NS71 199 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 QPCTLQ9NXS2 382 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 STUB1Q9UNE7 303 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 CMAHPQ9Y471 501 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 SNX8Q9Y5X2 465 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 ENPP4Q9Y6X5 453 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 VCANP13611 3396 aa12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 MTCL1Q9Y4B5 1905 aaKnown RBP12.86□□□□□ -0.35
SMPDL3B-206ENST00000549094 CXorf51AA0A1B0GTR3 108 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 A0A1W2PQ67 120 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 TMEM229AB2RXF0 380 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 ZNF670-ZNF695F2Z2N8 137 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 AP2A2O94973 939 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 ADAP00813 363 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 RHCEP18577 417 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 IDSP22304 550 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 CHMP24386 653 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 PSMA1P25786 263 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 LIMS1P48059 325 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 CRISP1P54107 249 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 SNRPGP62308 76 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 PSPHP78330 225 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 ASAH1Q13510 395 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 DDX39BQ13838 428 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 TAF12Q16514 161 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 CRB2Q5IJ48 1285 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 TMEM201Q5SNT2 666 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 CRTC1Q6UUV9 634 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 ANGPTL8Q6UXH0 198 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 CCDC149Q6ZUS6 474 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 ADGRD2Q7Z7M1 963 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 THOC6Q86W42 341 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 BBS7Q8IWZ6 715 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 NAGSQ8N159 534 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 KREMEN2Q8NCW0 462 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 OR6K2Q8NGY2 324 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 KLHL6Q8WZ60 621 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 C11orf24Q96F05 449 aaPredicted RBP12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 TRMT2BQ96GJ1 504 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 OPALINQ96PE5 141 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 OR5M11Q96RB7 305 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 SYNDIG1Q9H7V2 258 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 BRD9Q9H8M2 597 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 MARCH7Q9H992 704 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 SGK2Q9HBY8 427 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 PRM3Q9NNZ6 103 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 ERVK13-1Q9NX77 482 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 DPP7Q9UHL4 492 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
SMPDL3B-206ENST00000549094 NPIPB15A6NHN6 443 aaPredicted RBP12.84□□□□□ -0.35
SMPDL3B-206ENST00000549094 GABRR3A8MPY1 467 aa12.84□□□□□ -0.35
SMPDL3B-206ENST00000549094 RGS5O15539 181 aa12.84□□□□□ -0.35
SMPDL3B-206ENST00000549094 PCDH7O60245 1069 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms