RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PHGDHO43175 533 aaKnown RBP18.94■□□□□ 0.62
SSH1-207ENST00000547862 ZFAND5O76080 213 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 OR6B1O95007 311 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 SOX3P41225 446 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 HSPA7P48741 367 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 HSD17B7P56937 341 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 TGFBIQ15582 683 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 VN1R5Q7Z5H4 357 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 ZBED8Q8IZ13 594 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 ARMC10Q8N2F6 343 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 OR2L5Q8NG80 312 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 QRFPRQ96P65 431 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 NPLQ9BXD5 320 aaPredicted RBP18.94■□□□□ 0.62
SSH1-207ENST00000547862 RHOJQ9H4E5 214 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 DNAJC11Q9NVH1 559 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 CLDN16Q9Y5I7 305 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 DNAJC13O75165 2243 aa18.94■□□□□ 0.62
SSH1-207ENST00000547862 USP27XA6NNY8 438 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 SH3BGRLO75368 114 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 MTTPP55157 894 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 LIM2P55344 173 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 MRPS25P82663 173 aaKnown RBP18.93■□□□□ 0.62
SSH1-207ENST00000547862 ID2Q02363 134 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 XKR6Q5GH73 641 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 ZNF595Q8IYB9 648 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 ZFP62Q8NB50 900 aaPredicted RBP18.93■□□□□ 0.62
SSH1-207ENST00000547862 C16orf52Q8NHV5 167 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 ANKRD7Q92527 254 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 SERINC2Q96SA4 455 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 OR8D2Q9GZM6 311 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 SMYD2Q9NRG4 433 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 YARS2Q9Y2Z4 477 aaKnown RBP18.93■□□□□ 0.62
SSH1-207ENST00000547862 HRH3Q9Y5N1 445 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 CLCA3PQ9Y6N3 262 aa18.93■□□□□ 0.62
SSH1-207ENST00000547862 EFCAB8A8MWE9 144 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 ACOT7O00154 380 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 TAPBPO15533 448 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 CLEC3AO75596 197 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 PPIAP62937 165 aaKnown RBP18.92■□□□□ 0.62
SSH1-207ENST00000547862 FRG1Q14331 258 aaKnown RBP18.92■□□□□ 0.62
SSH1-207ENST00000547862 ELAVL1Q15717 326 aaKnown RBP18.92■□□□□ 0.62
SSH1-207ENST00000547862 ARHGAP11AQ6P4F7 1023 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 GPSM1Q86YR5 675 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 CCDC71Q8IV32 467 aaPredicted RBP18.92■□□□□ 0.62
SSH1-207ENST00000547862 TMEM132CQ8N3T6 1108 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 ZNF321PQ8N8H1 164 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 C14orf79Q96F83 325 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 RUNDC3BQ96NL0 473 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 F2RL3Q96RI0 385 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 SPOCK3Q9BQ16 436 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 UCK2Q9BZX2 261 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 DERL2Q9GZP9 239 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 TP63Q9H3D4 680 aaPredicted RBP18.92■□□□□ 0.62
SSH1-207ENST00000547862 NSMCE4AQ9NXX6 385 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 CD274Q9NZQ7 290 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 RNF6Q9Y252 685 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 MTO1Q9Y2Z2 717 aaKnown RBP18.92■□□□□ 0.62
SSH1-207ENST00000547862 SNX24Q9Y343 169 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 LIPGQ9Y5X9 500 aa18.92■□□□□ 0.62
SSH1-207ENST00000547862 NPIPA2E9PIF3 369 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 NPIPA3F8WFD2 350 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 CCNT2O60583 730 aaKnown RBP18.91■□□□□ 0.62
SSH1-207ENST00000547862 PRAMEF4O60810 478 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 LDB3O75112 727 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 TBX6O95947 436 aaPredicted RBP18.91■□□□□ 0.62
SSH1-207ENST00000547862 CCDC166P0CW27 439 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 TNNI3P19429 210 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 RPL21P46778 160 aaKnown RBP18.91■□□□□ 0.62
SSH1-207ENST00000547862 STX4Q12846 297 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 OR4D1Q15615 310 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 PRAMEF9Q5VWM5 478 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 ABHD17CQ6PCB6 329 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 HSDL2Q6YN16 418 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 OR2M7Q8NG81 312 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 OR5M9Q8NGP3 310 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 OR5M3Q8NGP4 307 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 RASL10BQ96S79 203 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 ENKD1Q9H0I2 346 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 KCNF1Q9H3M0 494 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 CNOT10Q9H9A5 744 aaKnown RBP18.91■□□□□ 0.62
SSH1-207ENST00000547862 POPDC3Q9HBV1 291 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 MOCS1Q9NZB8 636 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 GPRC5BQ9NZH0 403 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 TXNDC16Q9P2K2 825 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 DAPP1Q9UN19 280 aa18.91■□□□□ 0.62
SSH1-207ENST00000547862 TMEM200CA6NKL6 621 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 RTCAO00442 366 aaKnown RBP18.9■□□□□ 0.62
SSH1-207ENST00000547862 FANCGO15287 622 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 S100BP04271 92 aaPredicted RBP18.9■□□□□ 0.62
SSH1-207ENST00000547862 PCNAP12004 261 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 CD22P20273 847 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 GSTM2P28161 218 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 HPDP32754 393 aaPredicted RBP18.9■□□□□ 0.62
SSH1-207ENST00000547862 GMPRP36959 345 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 MSH2P43246 934 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 GPR143P51810 404 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 HK2P52789 917 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 TGM3Q08188 693 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 DOC2AQ14183 400 aa18.9■□□□□ 0.62
SSH1-207ENST00000547862 PDK4Q16654 411 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms