RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 JUNP05412 331 aaKnown RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 TROVE2P10155 538 aaKnown RBP eCLIP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 PTX3P26022 381 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 HMGCS1Q01581 520 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 TGM3Q08188 693 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 NR6A1Q15406 480 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 NDUFA9Q16795 377 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 TUBB8Q3ZCM7 444 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 KHDRBS2Q5VWX1 349 aaKnown RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 TLDC1Q6P9B6 456 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 RNF165Q6ZSG1 346 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 ABHD13Q7L211 337 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 KCT2Q8NC54 265 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 GAL3ST3Q96A11 431 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 CLIP3Q96DZ5 547 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 THOC1Q96FV9 657 aaKnown RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 ZNF317Q96PQ6 595 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 CCT7Q99832 543 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 NDC1Q9BTX1 674 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 TRIM55Q9BYV6 548 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 ACPTQ9BZG2 426 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 SLC7A5P2Q9GIP4 190 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 SLC6A16Q9GZN6 736 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 REXO4Q9GZR2 422 aaKnown RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 TUBB1Q9H4B7 451 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 NPHS2Q9NP85 383 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 RIC8BQ9NVN3 520 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 NMRK1Q9NWW6 199 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 C5AR2Q9P296 337 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 PPT2Q9UMR5 302 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 PADI2Q9Y2J8 665 aa11.43□□□□□ -0.58
HDAC7-226ENST00000547259 SPENQ96T58 3664 aaKnown RBP11.43□□□□□ -0.58
HDAC7-226ENST00000547259 POLEQ07864 2286 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 CRYBG3Q68DQ2 2970 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 HYKKA2RU49 373 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 LRIT2A6NDA9 550 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 ENO4A6NNW6 628 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 MEN1O00255 615 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 ERI3O43414 337 aaKnown RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 RSL1D1O76021 490 aaKnown RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 SORBS2O94875 1100 aaKnown RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 TGDSO95455 350 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 TBX6O95947 436 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 ZNF888P0CJ79 500 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 AGXTP21549 392 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 SEC24CP53992 1094 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 RAB8AP61006 207 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 HYAL2Q12891 473 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 CUL3Q13618 768 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 INPP5JQ15735 1006 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 PRTGQ2VWP7 1150 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 TMEM35AQ53FP2 167 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 XKR7Q5GH72 579 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 SPDYAQ5MJ70 313 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 DEPDC1Q5TB30 811 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 TMEM214Q6NUQ4 689 aaKnown RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 TRIM40Q6P9F5 258 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 FAM199XQ6PEV8 388 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 TRIM46Q7Z4K8 759 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 RAB43Q86YS6 212 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 DSELQ8IZU8 1212 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 SRFBP1Q8NEF9 429 aaKnown RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 OR2L5Q8NG80 312 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 OR2T11Q8NH01 316 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 PNPLA2Q96AD5 504 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 TUBGCP3Q96CW5 907 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 MS4A6EQ96DS6 147 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 F2RL3Q96RI0 385 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 SIKE1Q9BRV8 207 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 FAM107BQ9H098 131 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 CHST8Q9H2A9 424 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 KLHL31Q9H511 634 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 COPS7BQ9H9Q2 264 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 CUTCQ9NTM9 273 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 PSD3Q9NYI0 1048 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 GPR83Q9NYM4 423 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 VPS29Q9UBQ0 182 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 NDOR1Q9UHB4 597 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 ADAM21Q9UKJ8 722 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 TCFL5Q9UL49 500 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 SRPK3Q9UPE1 567 aa11.42□□□□□ -0.58
HDAC7-226ENST00000547259 MRPS2Q9Y399 296 aaKnown RBP11.42□□□□□ -0.58
HDAC7-226ENST00000547259 DIDO1Q9BTC0 2240 aaKnown RBP11.41□□□□□ -0.58
HDAC7-226ENST00000547259 A0A0G2JN53 185 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 GOLGA8QA0A0J9YX86 632 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ATP6AP2A0A1C7CYW4 349 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 FITM1A5D6W6 292 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 GOLGA8OA6NCC3 632 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 GMNCA6NCL1 334 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 C9J4A7 227 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 GOLGA8NF8WBI6 632 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 H3BMH7 237 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 SDHDO14521 159 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ZNF749O43361 778 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 DIAPH2O60879 1101 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ATP6AP2O75787 350 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 SEMA3DO95025 777 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 PDGFAP04085 211 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ALPPP05187 535 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms