RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 Q6ZNB5 142 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 PRR23CQ6ZRP0 262 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 TMEM150AQ86TG1 271 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 SLC34A3Q8N130 599 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 SIMC1Q8NDZ2 872 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 ECHDC3Q96DC8 303 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 SLC6A18Q96N87 628 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 REEP4Q9H6H4 257 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 ENOPH1Q9UHY7 261 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 RAB23Q9ULC3 237 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 KLHL20Q9Y2M5 609 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 YIPF1Q9Y548 306 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 MAU2Q9Y6X3 613 aa12.12□□□□□ -0.47
CACNB3-204ENST00000547230 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 FADS2P1A8MWK0 482 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 FFAR1O14842 300 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SOX14O95416 240 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 LATS1O95835 1130 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 CYP17A1P05093 508 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 HBQ1P09105 142 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SRCP12931 536 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 PRKCAP17252 672 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SPINT3P49223 89 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 LARS2Q15031 903 aaKnown RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SPHARQ15513 63 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SLC5A12Q1EHB4 618 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 PRSS53Q2L4Q9 553 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 TRIM60Q495X7 471 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 Q5BKY6 102 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 PAQR6Q6TCH4 344 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 TAGAPQ8N103 731 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 OXR1Q8N573 874 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 ARL14EPQ8N8R7 260 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SLC7A6Q92536 515 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 FYTTD1Q96QD9 318 aaKnown RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 RANGRFQ9HD47 186 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 B4GALT6Q9UBX8 382 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SEC14L4Q9UDX3 406 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 NUFIP1Q9UHK0 495 aaKnown RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 STUB1Q9UNE7 303 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 MAPRE3Q9UPY8 281 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 CMAHPQ9Y471 501 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 A0A0B4J293 547 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 HYKKA2RU49 373 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 OR2AG2A6NM03 316 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 TPST2O60704 377 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 TRAPPC2P0DI81 140 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 TRAPPC2BP0DI82 140 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 ARAFP10398 606 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 RHCEP18577 417 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 CST5P28325 142 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 CHI3L1P36222 383 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 RPS5P46782 204 aaKnown RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 FLT3LGP49771 235 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 LIM2P55344 173 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 MXD1Q05195 221 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 ZNF763Q0D2J5 394 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 BCDIN3DQ7Z5W3 292 aaKnown RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 HS6ST3Q8IZP7 471 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 FAM181AQ8N9Y4 354 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SCAMP4Q969E2 229 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 CXorf40BQ96DE9 158 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 RNF31Q96EP0 1072 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 PKP4Q99569 1192 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 WRAP53Q9BUR4 548 aaKnown RBP12.11□□□□□ -0.47
CACNB3-204ENST00000547230 VN1R3Q9BXE9 311 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 MIXL1Q9H2W2 232 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 SUV39H2Q9H5I1 410 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 NDUFB11Q9NX14 153 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 REV1Q9UBZ9 1251 aa12.11□□□□□ -0.47
CACNB3-204ENST00000547230 OBSL1O75147 1896 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 IQCMA0A1B0GVH7 501 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 ARRDC5A6NEK1 342 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 SAP18O00422 153 aaKnown RBP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 PSIP1O75475 530 aaKnown RBP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 FURINP09958 794 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 POLR2EP19388 210 aaKnown RBP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 PSMA1P25786 263 aaKnown RBP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 IMPA1P29218 277 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 SOAT1P35610 550 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 PREPP48147 710 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 SNRPGP62308 76 aaKnown RBP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 DAB2P98082 770 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 LRRC74AQ0VAA2 488 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 CRHR2Q13324 411 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 ASAH1Q13510 395 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 PUM1Q14671 1186 aaKnown RBP eCLIP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 GPR162Q16538 588 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 DUSP7Q16829 419 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 ZNF630Q2M218 657 aaPredicted RBP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 GLYR1Q49A26 553 aaPredicted RBP12.1□□□□□ -0.47
CACNB3-204ENST00000547230 TRIM40Q6P9F5 258 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 GDPGP1Q6ZNW5 385 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 COMMD6Q7Z4G1 85 aa12.1□□□□□ -0.47
CACNB3-204ENST00000547230 LILRA3Q8N6C8 439 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms