RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 TMEM52Q8NDY8 209 aa17.46■□□□□ 0.39
CHPT1-202ENST00000546490 PHF10Q8WUB8 498 aaKnown RBP17.46■□□□□ 0.39
CHPT1-202ENST00000546490 EXT2Q93063 718 aa17.46■□□□□ 0.39
CHPT1-202ENST00000546490 WDR34Q96EX3 536 aa17.46■□□□□ 0.39
CHPT1-202ENST00000546490 PRM3Q9NNZ6 103 aa17.46■□□□□ 0.39
CHPT1-202ENST00000546490 ZNF223Q9UK11 482 aaPredicted RBP17.46■□□□□ 0.39
CHPT1-202ENST00000546490 RNF112Q9ULX5 631 aa17.46■□□□□ 0.39
CHPT1-202ENST00000546490 DAPP1Q9UN19 280 aa17.46■□□□□ 0.39
CHPT1-202ENST00000546490 CLDN16Q9Y5I7 305 aa17.46■□□□□ 0.39
CHPT1-202ENST00000546490 OTOGQ6ZRI0 2925 aa17.46■□□□□ 0.39
CHPT1-202ENST00000546490 FAM159BA6NKW6 160 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 ZFAND5O76080 213 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 TBX6O95947 436 aaPredicted RBP17.45■□□□□ 0.38
CHPT1-202ENST00000546490 GSTA2P09210 222 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 PTGER1P34995 402 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 KCNC1P48547 511 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 LIM2P55344 173 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 RAB10P61026 200 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 MRPS25P82663 173 aaKnown RBP17.45■□□□□ 0.38
CHPT1-202ENST00000546490 DOC2AQ14183 400 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 HIST2H2ACQ16777 129 aaPredicted RBP17.45■□□□□ 0.38
CHPT1-202ENST00000546490 HIST2H2AA3Q6FI13 130 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 ADNP2Q6IQ32 1131 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 LRRC70Q7Z2Q7 622 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 SULF2Q8IWU5 870 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 CTAGE3PQ8IX95 158 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 KIAA1191Q96A73 305 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 ESAMQ96AP7 390 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 MTFMTQ96DP5 389 aaKnown RBP17.45■□□□□ 0.38
CHPT1-202ENST00000546490 KCNC2Q96PR1 638 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 PHF12Q96QT6 1004 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 CSF3RQ99062 836 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 ROGDIQ9GZN7 287 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 TIMMDC1Q9NPL8 285 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 ERVK-11Q9UQG0 969 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 YARS2Q9Y2Z4 477 aaKnown RBP17.45■□□□□ 0.38
CHPT1-202ENST00000546490 ASB1Q9Y576 335 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 CLCA3PQ9Y6N3 262 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 EML6Q6ZMW3 1958 aa17.45■□□□□ 0.38
CHPT1-202ENST00000546490 A8MVJ9 347 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 E9PLN8 166 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 RAD51CO43502 376 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 PEX1O43933 1283 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 CCNT2O60583 730 aaKnown RBP17.44■□□□□ 0.38
CHPT1-202ENST00000546490 TUBB4AP04350 444 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 IFNA16P05015 189 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 SNRPB2P08579 225 aaKnown RBP17.44■□□□□ 0.38
CHPT1-202ENST00000546490 SPRP35270 261 aaPredicted RBP17.44■□□□□ 0.38
CHPT1-202ENST00000546490 RFC3P40938 356 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 IRF8Q02556 426 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 BMPR2Q13873 1038 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 SLMAPQ14BN4 828 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 EFTUD2Q15029 972 aaKnown RBP eCLIP17.44■□□□□ 0.387e-11■■■□□ 18.8
CHPT1-202ENST00000546490 CYS1Q717R9 158 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 DOLPP1Q86YN1 238 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 CHERPQ8IWX8 916 aaKnown RBP17.44■□□□□ 0.38
CHPT1-202ENST00000546490 GPALPP1Q8IXQ4 340 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 SRFBP1Q8NEF9 429 aaKnown RBP17.44■□□□□ 0.38
CHPT1-202ENST00000546490 OR14A16Q8NHC5 309 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 DAZLQ92904 295 aaKnown RBP17.44■□□□□ 0.38
CHPT1-202ENST00000546490 UBXN10Q96LJ8 280 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 VKORC1Q9BQB6 163 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 PHACTR1Q9C0D0 580 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 HPF1Q9NWY4 346 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 NUDT4Q9NZJ9 180 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 PTBP2Q9UKA9 531 aaKnown RBP17.44■□□□□ 0.38
CHPT1-202ENST00000546490 ZNF490Q9ULM2 529 aaPredicted RBP17.44■□□□□ 0.38
CHPT1-202ENST00000546490 SPACA6W5XKT8 324 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 TACC2O95359 2948 aa17.44■□□□□ 0.38
CHPT1-202ENST00000546490 PDZD2O15018 2839 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 PHF3Q92576 2039 aaKnown RBP17.43■□□□□ 0.38
CHPT1-202ENST00000546490 CYR61O00622 381 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 FANCGO15287 622 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 ZNHIT1O43257 154 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 HS6ST1O60243 411 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 CDC40O60508 579 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHPT1-202ENST00000546490 PRAMEF4O60810 478 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 CD22P20273 847 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 ELAVL4P26378 380 aaKnown RBP17.43■□□□□ 0.38
CHPT1-202ENST00000546490 MSH2P43246 934 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 GPR143P51810 404 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 GPR85P60893 370 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 STX4Q12846 297 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 CHIT1Q13231 466 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 TBCCQ15814 346 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 PRAMEF9Q5VWM5 478 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 C3orf62Q6ZUJ4 267 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 NCCRP1Q6ZVX7 275 aaPredicted RBP17.43■□□□□ 0.38
CHPT1-202ENST00000546490 RAPH1Q70E73 1250 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 MDGA2Q7Z553 956 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 ZFP62Q8NB50 900 aaPredicted RBP17.43■□□□□ 0.38
CHPT1-202ENST00000546490 PSD4Q8NDX1 1056 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 SPATA4Q8NEY3 305 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 C16orf52Q8NHV5 167 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 FAM57AQ8TBR7 257 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 ASB15Q8WXK1 588 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 UBE2E3Q969T4 207 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 F2RL3Q96RI0 385 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 MS4A8Q9BY19 250 aa17.43■□□□□ 0.38
CHPT1-202ENST00000546490 CD244Q9BZW8 370 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms