RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	ZNF793	Q6ZN11	406 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	TIFAB	Q6ZNK6	161 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	TEX9	Q8N6V9	391 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	EIF1AD	Q8N9N8	165 aa	Known RBP	12.54	□□□□□ -0.4
POLE-222	ENST00000545015	APCDD1L	Q8NCL9	501 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	TMEM52	Q8NDY8	209 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	SUN3	Q8TAQ9	357 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	SSC4D	Q8WTU2	575 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	NR4A3	Q92570	626 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	TXLNGY	Q9BZA5	131 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
POLE-222	ENST00000545015	COPS7B	Q9H9Q2	264 aa	Predicted RBP	12.54	□□□□□ -0.4
POLE-222	ENST00000545015	PRTFDC1	Q9NRG1	225 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	FETUB	Q9UGM5	382 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	NFU1	Q9UMS0	254 aa		12.54	□□□□□ -0.4
POLE-222	ENST00000545015	TGFBR3L	H3BV60	316 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	CTNS	O60931	367 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	AGFG2	O95081	481 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	CRYAB	P02511	175 aa	Known RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	SNRPA	P09012	282 aa	Known RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	HIST1H1T	P22492	207 aa	Predicted RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	GCA	P28676	217 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	TRHR	P34981	398 aa	Predicted RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	TDGF1P3	P51864	188 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	HNRNPF	P52597	415 aa	Known RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	GTF2H2	Q13888	395 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	C10orf62	Q5T681	223 aa	Predicted RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	FCRLB	Q6BAA4	426 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	GTF2H2C	Q6P1K8	395 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	ADGRD1	Q6QNK2	874 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	GOLGA7	Q7Z5G4	137 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	LCA5	Q86VQ0	697 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	RPS19BP1	Q86WX3	136 aa	Known RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	ACOT4	Q8N9L9	421 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	B3GNT7	Q8NFL0	401 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	HUS1B	Q8NHY5	278 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	WDR20	Q8TBZ3	569 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	REPS1	Q96D71	796 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	TRIM44	Q96DX7	344 aa	Predicted RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	MTBP	Q96DY7	904 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	SCMH1	Q96GD3	660 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	UTP23	Q9BRU9	249 aa	Known RBP	12.53	□□□□□ -0.4
POLE-222	ENST00000545015	NTMT1	Q9BV86	223 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	C1QTNF3	Q9BXJ4	246 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	IPPK	Q9H8X2	491 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	ADAP2	Q9NPF8	381 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	DMRT3	Q9NQL9	472 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	OLAH	Q9NV23	265 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	ZNF358	Q9NW07	568 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	ANGPTL3	Q9Y5C1	460 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	HIVEP3	Q5T1R4	2406 aa		12.53	□□□□□ -0.4
POLE-222	ENST00000545015	ASPDH	A6ND91	283 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	GABRR3	A8MPY1	467 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	TRIM49D1	C9J1S8	452 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	FOXE1	O00358	373 aa	Predicted RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	RIPK2	O43353	540 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	MAN1A2	O60476	641 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	RASAL1	O95294	804 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	SIX3	O95343	332 aa	Predicted RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	TGFB1	P01137	390 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	GP1BB	P13224	206 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	PTX3	P26022	381 aa	Predicted RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	CD96	P40200	585 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	CLCN2	P51788	898 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	MLF1	P58340	268 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	IGLV3-21	P80748	117 aa	Predicted RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	CUL3	Q13618	768 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	SERTAD2	Q14140	314 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	ELOA	Q14241	798 aa	Known RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	ELAVL1	Q15717	326 aa	Known RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	AP5B1	Q2VPB7	878 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	ZNF766	Q5HY98	468 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	LGSN	Q5TDP6	509 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	OR4C11	Q6IEV9	310 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	CYP4X1	Q8N118	509 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	TMEM151A	Q8N4L1	468 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	KIF2B	Q8N4N8	673 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	HORMAD2	Q8N7B1	307 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	FAM47B	Q8NA70	645 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	PRR7	Q8TB68	274 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	SIGLEC12	Q96PQ1	595 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	CSF3R	Q99062	836 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	MRPL57	Q9BQC6	102 aa	Known RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	MRPL46	Q9H2W6	279 aa	Known RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	CDCP1	Q9H5V8	836 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	ACTR8	Q9H981	624 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	L2HGDH	Q9H9P8	463 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	MS4A12	Q9NXJ0	267 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	CPSF2	Q9P2I0	782 aa	Known RBP	12.52	□□□□□ -0.41
POLE-222	ENST00000545015	XPR1	Q9UBH6	696 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	VTI1B	Q9UEU0	232 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	SLC5A6	Q9Y289	635 aa		12.52	□□□□□ -0.41
POLE-222	ENST00000545015	EXOC1L	A0A1B0GW35	172 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	LRRC14B	A6NHZ5	514 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	POC1B-GALNT4	F8VUJ3	575 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	PLPP1	O14494	284 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	OR7A17	O14581	309 aa		12.51	□□□□□ -0.41
POLE-222	ENST00000545015	NEURL1	O76050	574 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms