RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 SMN1Q16637 294 aaKnown RBP14.35□□□□□ -0.11
CHFR-223ENST00000544268 CTRB2Q6GPI1 263 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 ZNF621Q6ZSS3 439 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 GATAD2AQ86YP4 633 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 GPR156Q8NFN8 814 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 PANX1Q96RD7 426 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 UQCC2Q9BRT2 126 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 SLC29A3Q9BZD2 475 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 DYRK4Q9NR20 520 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 FAM220BPB1ANY3 271 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 GFYI3L273 518 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 ERVH48-1M5A8F1 160 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 SCELO95171 688 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 MAGP20916 626 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 NUDT1P36639 197 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 P2RY2P41231 377 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 ST13P50502 369 aaKnown RBP14.35□□□□□ -0.11
CHFR-223ENST00000544268 TSTA3Q13630 321 aaPredicted RBP14.35□□□□□ -0.11
CHFR-223ENST00000544268 XKR6Q5GH73 641 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 ERN2Q76MJ5 926 aaKnown RBP14.35□□□□□ -0.11
CHFR-223ENST00000544268 ZDHHC21Q8IVQ6 265 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 TMEM151BQ8IW70 566 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 TMEM132CQ8N3T6 1108 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 SH3KBP1Q96B97 665 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 ZHX1-C8orf76Q96EF9 292 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 PYURFQ96I23 114 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 GAS2L1Q99501 681 aaPredicted RBP14.35□□□□□ -0.11
CHFR-223ENST00000544268 ASIC5Q9NY37 505 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 SH2B3Q9UQQ2 575 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 CKAP5Q14008 2032 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 MYO10Q9HD67 2058 aa14.35□□□□□ -0.11
CHFR-223ENST00000544268 C1QTNF3-AMACRE9PGA6 284 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 FPGTO14772 594 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 POLR1CO15160 346 aaPredicted RBP14.34□□□□□ -0.11
CHFR-223ENST00000544268 ERN1O75460 977 aaKnown RBP14.34□□□□□ -0.11
CHFR-223ENST00000544268 TNFRSF4P43489 277 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 IRF8Q02556 426 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 CNTN1Q12860 1018 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 FADDQ13158 208 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 NAE1Q13564 534 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 C2orf27AQ580R0 203 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 ATG9BQ674R7 924 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 FAM180BQ6P0A1 224 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 SPATC1Q76KD6 591 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 LRRC70Q7Z2Q7 622 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 SYT12Q8IV01 421 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 SAMD14Q8IZD0 417 aaPredicted RBP14.34□□□□□ -0.11
CHFR-223ENST00000544268 L3MBTL4Q8NA19 623 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 ST6GAL2Q96JF0 529 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 COQ10AQ96MF6 247 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 VPS35Q96QK1 796 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 TMEM121BQ9BXQ6 578 aaPredicted RBP14.34□□□□□ -0.11
CHFR-223ENST00000544268 MIR1-1HGQ9H1L0 117 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 RIBC2Q9H4K1 309 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 KCNK12Q9HB15 430 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 TRIM39Q9HCM9 518 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 PRDM8Q9NQV8 689 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 DNAJC11Q9NVH1 559 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 NFKBIL1Q9UBC1 381 aaPredicted RBP14.34□□□□□ -0.11
CHFR-223ENST00000544268 WBP11Q9Y2W2 641 aaKnown RBP14.34□□□□□ -0.11
CHFR-223ENST00000544268 BOLA1Q9Y3E2 137 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 A3GALT2U3KPV4 340 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 MAGEB17A8MXT2 336 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 CLIC1O00299 241 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 SAP18O00422 153 aaKnown RBP14.34□□□□□ -0.11
CHFR-223ENST00000544268 WNT9AO14904 365 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 SCN2BO60939 215 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 RETP07949 1114 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 CBSLP0DN79 551 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 ACPPP15309 386 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 TNFRSF1BP20333 461 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 GTF2E2P29084 291 aaKnown RBP14.34□□□□□ -0.11
CHFR-223ENST00000544268 RYKP34925 604 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 CBSP35520 551 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 KIR3DL1P43629 444 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 DAPP51397 102 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 CRYBA2P53672 197 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 ELP6Q0PNE2 266 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 DOC2AQ14183 400 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 YIF1BQ5BJH7 314 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 IER5LQ5T953 404 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 CPZQ66K79 652 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 IDO2Q6ZQW0 420 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 PTOV1Q86YD1 416 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 TRAM1L1Q8N609 369 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 PSD4Q8NDX1 1056 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 MCOLN3Q8TDD5 553 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 AP2M1Q96CW1 435 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 CMTM7Q96FZ5 175 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 ZSCAN5AQ9BUG6 496 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 EPS8L2Q9H6S3 715 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 C12orf4Q9NQ89 552 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 SIRT5Q9NXA8 310 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 MAN2B2Q9Y2E5 1009 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 ZNF451Q9Y4E5 1061 aa14.34□□□□□ -0.11
CHFR-223ENST00000544268 METTL15A6NJ78 407 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 MID1O15344 667 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 MBTPS2O43462 519 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 MMP20O60882 483 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms