RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
HCFC2-202ENST00000544223 FAM220BPB1ANY3 271 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 RNASET2O00584 256 aaKnown RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 DLGAP1O14490 977 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 KIF1CO43896 1103 aaKnown RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 GPR37L1O60883 481 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 KCNJ13O60928 360 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 GCM2O75603 506 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 FAM58BPP0C7Q3 252 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 GPX2P18283 190 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 FUT4P22083 530 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 ABHD18Q0P651 414 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 VMACQ2NL98 169 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 DEFB134Q4QY38 66 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 WDR53Q7Z5U6 358 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 PAQR7Q86WK9 346 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 FAM47BQ8NA70 645 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 SIMC1Q8NDZ2 872 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 YIPF4Q9BSR8 244 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 RAB11FIP5Q9BXF6 653 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 BHLHE41Q9C0J9 482 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 GORASP2Q9H8Y8 452 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 DCAF13Q9NV06 445 aaKnown RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 VNN3Q9NY84 501 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 ABCG2Q9UNQ0 655 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 ARID1BQ8NFD5 2236 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 RP1P56715 2156 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 PI4KAP42356 2102 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 A0A0A6YYD5 115 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 UPK1AO00322 258 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 NOBOXO60393 691 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 BMP2P12643 396 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 CD38P28907 300 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 YAP1P46937 504 aaKnown RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 C21orf58P58505 322 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 ID2Q02363 134 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 VAC14Q08AM6 782 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 MED21Q13503 144 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 PDK3Q15120 406 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 RPS26P11Q5JNZ5 115 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 ABHD17CQ6PCB6 329 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 PRR23BQ6ZRT6 265 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 GPR155Q7Z3F1 870 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 ZC3H7AQ8IWR0 971 aaKnown RBP12.99□□□□□ -0.33
HCFC2-202ENST00000544223 ADHFE1Q8IWW8 467 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 PJA1Q8NG27 643 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 TMBIM1Q969X1 311 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 MAPKAP1Q9BPZ7 522 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 VCX3BQ9H321 246 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 FAM60AQ9NP50 221 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 AHSPQ9NZD4 102 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 WNT16Q9UBV4 365 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 KLHL3Q9UH77 587 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 BTNL2Q9UIR0 455 aa12.99□□□□□ -0.33
HCFC2-202ENST00000544223 A0A1W2PPC1 479 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 METTL12A8MUP2 240 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 CLEC3AO75596 197 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 ATP5A1P25705 553 aaKnown RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 OR1E2P47887 323 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 RGS19P49795 217 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 PRKAG1P54619 331 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 CHRNB3Q05901 458 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 TMTC4Q5T4D3 741 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 ANXA8L1Q5VT79 327 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 NKAIN2Q5VXU1 208 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 CAMKMTQ7Z624 323 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 CCDC116Q8IYX3 515 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 SMYD1Q8NB12 490 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 NFKBIDQ8NI38 313 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 MSANTD3Q96H12 275 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 CENPNQ96H22 339 aaPredicted RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 METTL2AQ96IZ6 378 aaKnown RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 GSDMCQ9BYG8 508 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 CHST8Q9H2A9 424 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 SMURF2Q9HAU4 748 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 TM9SF3Q9HD45 589 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 TAS2R9Q9NYW1 312 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 FAF1Q9UNN5 650 aaPredicted RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 AP1M2Q9Y6Q5 423 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 ZNF217O75362 1048 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 SNAP29O95721 258 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 CST1P01037 141 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 LYNP07948 512 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 HIST1H1TP22492 207 aaPredicted RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 UBE2IP63279 158 aaKnown RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 FAM98BQ52LJ0 330 aaKnown RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 FIGLAQ6QHK4 219 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 OFCC1Q8IZS5 231 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 ANKFN1Q8N957 763 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 OR5T3Q8NGG3 340 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 OR5D16Q8NGK9 328 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 GATA6Q92908 595 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 FBXL20Q96IG2 436 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 DDX31Q9H8H2 851 aaKnown RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 ATAD3AQ9NVI7 634 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 SIRT5Q9NXA8 310 aa12.98□□□□□ -0.33
HCFC2-202ENST00000544223 MRPS17Q9Y2R5 130 aaKnown RBP12.98□□□□□ -0.33
HCFC2-202ENST00000544223 TLR4O00206 839 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 CLOCKO15516 846 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 SEC24DO94855 1032 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms