RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 GULP1Q9UBP9 304 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 WDR37Q9Y2I8 494 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 TESMINQ9Y4I5 508 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 KLK4Q9Y5K2 254 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 KCNE2Q9Y6J6 123 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 SZT2Q5T011 3432 aa4.97□□□□□ -1.61
ATPAF1-212ENST00000542495 A0A1W2PP55 124 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SH3D21A4FU49 640 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SAGE2PA6NJ88 616 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 OR2AG2A6NM03 316 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 J3QL48 77 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SPINT1O43278 529 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 BNIP3LO60238 219 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PQBP1O60828 265 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 LILRB5O75023 590 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ATG13O75143 517 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 C1orf105O95561 183 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 C6orf47O95873 294 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 RPLP0P05388 317 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 RB1P06400 928 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ADORA3P0DMS8 318 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 C1GALT1C1LP0DN25 315 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ARAFP10398 606 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ITGA2P17301 1181 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 GJA1P17302 382 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 TNFRSF1BP20333 461 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 CBLP22681 906 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 CHMP24386 653 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 AQP1P29972 269 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 BMP8BP34820 402 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 RPL3P39023 403 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 MMP12P39900 470 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC15A1P46059 708 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PREPP48147 710 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 CLK1P49759 484 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PRKCDQ05655 676 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 FPGSQ05932 587 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 DNASE1L3Q13609 305 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SCARB2Q14108 478 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SYT16Q17RD7 645 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PRSS53Q2L4Q9 553 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF630Q2M218 657 aaPredicted RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 EXOC3L2Q2M3D2 409 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 BCL7AQ4VC05 210 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SYTL3Q4VX76 610 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SPOUT1Q5T280 376 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PEAR1Q5VY43 1037 aaPredicted RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM215Q68D42 235 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF770Q6IQ21 691 aaPredicted RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PNCKQ6P2M8 343 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 UNC5DQ6UXZ4 953 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 OTOP2Q7RTS6 562 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 COMMD6Q7Z4G1 85 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 DEFB128Q7Z7B8 93 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC22A16Q86VW1 577 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ARMC8Q8IUR7 673 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 LYSMD2Q8IV50 215 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC30A8Q8IWU4 369 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 NRSN1Q8IZ57 195 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 LGI4Q8N135 537 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 METTL4Q8N3J2 472 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 OXR1Q8N573 874 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 LILRA3Q8N6C8 439 aaPredicted RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF557Q8N988 423 aaPredicted RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 KBTBD8Q8NFY9 601 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 CDC26Q8NHZ8 85 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PSMA8Q8TAA3 256 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SNIP1Q8TAD8 396 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 C9orf43Q8TAL5 461 aaPredicted RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SPPL2AQ8TCT8 520 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF675Q8TD23 568 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 C16orf78Q8WTQ4 265 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF480Q8WV37 535 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 APOBEC4Q8WW27 367 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 GEMIN6Q8WXD5 167 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PROX1Q92786 737 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 MED8Q96G25 268 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 RHOVQ96L33 236 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 PIP5K1AQ99755 562 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 NIPSNAP1Q9BPW8 284 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC35A5Q9BS91 424 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 EFCAB11Q9BUY7 163 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SMG9Q9H0W8 520 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ZBP1Q9H171 429 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ZBTB20Q9HC78 741 aaPredicted RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 FZD3Q9NPG1 666 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 DMRT3Q9NQL9 472 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 CNOT2Q9NZN8 540 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SH3BP4Q9P0V3 963 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 FTSJ1Q9UET6 329 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 RAPGEFL1Q9UHV5 662 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 KCND3Q9UK17 655 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 SH2B3Q9UQQ2 575 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 CCL26Q9Y258 94 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF451Q9Y4E5 1061 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 CFAP20Q9Y6A4 193 aaKnown RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 MN1Q10571 1320 aaPredicted RBP4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 DSPPQ9NZW4 1301 aa4.96□□□□□ -1.61
ATPAF1-212ENST00000542495 ALPK3Q96L96 1907 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms