RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 FGF21Q9NSA1 209 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 C14orf105Q9NVL8 296 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 TAS2R1Q9NYW7 299 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 ADA2Q9NZK5 511 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 RAPGEFL1Q9UHV5 662 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 NXT1Q9UKK6 140 aaKnown RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 PCDHA9Q9Y5H5 950 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 ZDBF2Q9HCK1 2354 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 KMT2EQ8IZD2 1858 aa11.19□□□□□ -0.62
VTN-202ENST00000539746 COL5A1P20908 1838 aaPredicted RBP11.19□□□□□ -0.62
VTN-202ENST00000539746 COL6A3P12111 3177 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 FANCMQ8IYD8 2048 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 IGHV5-51A0A0C4DH38 117 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 A0A1B0GX78 115 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 B4E171 279 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 TMEM150CB9EJG8 249 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 PROB1E7EW31 1015 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 SAP18O00422 153 aaKnown RBP11.18□□□□□ -0.62
VTN-202ENST00000539746 KLHL18O94889 574 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 IFNA14P01570 189 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 GPC1P35052 558 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 TSPAN7P41732 249 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 ALDH9A1P49189 494 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 NME5P56597 212 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 HSD17B7P56937 341 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 PSME3P61289 254 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 TRAP1Q12931 704 aaKnown RBP11.18□□□□□ -0.62
VTN-202ENST00000539746 FADDQ13158 208 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
VTN-202ENST00000539746 DEFB134Q4QY38 66 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 LRIF1Q5T3J3 769 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 PHF19Q5T6S3 580 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 INTS11Q5TA45 600 aaKnown RBP11.18□□□□□ -0.62
VTN-202ENST00000539746 FOXR1Q6PIV2 292 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 CEACAM20Q6UY09 585 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 TMEM64Q6YI46 380 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 GK5Q6ZS86 529 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 MED25Q71SY5 747 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 ARHGAP22Q7Z5H3 698 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 NET1Q7Z628 596 aaPredicted RBP11.18□□□□□ -0.62
VTN-202ENST00000539746 PROSER1Q86XN7 944 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 PLD3Q8IV08 490 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 SPNS2Q8IVW8 549 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 FBXW8Q8N3Y1 598 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 METTL25Q8N6Q8 603 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 POU5F2Q8N7G0 328 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 OR4K14Q8NGD5 310 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 OR56A1Q8NGH5 318 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.18□□□□□ -0.62
VTN-202ENST00000539746 FKBP10Q96AY3 582 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 SPNS1Q9H2V7 528 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 RPF2Q9H7B2 306 aaKnown RBP11.18□□□□□ -0.62
VTN-202ENST00000539746 YY1AP1Q9H869 796 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 C11orf16Q9NQ32 467 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 PRDM7Q9NQW5 492 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 TAS2R9Q9NYW1 312 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 KLHL3Q9UH77 587 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 UTS2RQ9UKP6 389 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 DAPP1Q9UN19 280 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 MMACHCQ9Y4U1 282 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 GMEB1Q9Y692 573 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.18□□□□□ -0.62
VTN-202ENST00000539746 CACNA1EQ15878 2313 aa11.18□□□□□ -0.62
VTN-202ENST00000539746 ABCA7Q8IZY2 2146 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 DOCK9Q9BZ29 2069 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 DUXAA6NLW8 204 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 NTN3O00634 580 aaPredicted RBP11.17□□□□□ -0.62
VTN-202ENST00000539746 DSCR3O14972 297 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 GSC2O15499 205 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 PROM1O43490 865 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 AKAP10O43572 662 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 ETHE1O95571 254 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 KLK3P07288 261 aaPredicted RBP11.17□□□□□ -0.62
VTN-202ENST00000539746 SMIM10L1P0DMW3 83 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 T-ENOLP0DO92 83 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 UQCRC2P22695 453 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 GALNSP34059 522 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 CHI3L1P36222 383 aaPredicted RBP11.17□□□□□ -0.62
VTN-202ENST00000539746 GFERP55789 205 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 RAB8AP61006 207 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 RAE1P78406 368 aaKnown RBP11.17□□□□□ -0.62
VTN-202ENST00000539746 CCL7P80098 99 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 PLIN5Q00G26 463 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 OCA2Q04671 838 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 DSG2Q14126 1118 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 SPDYE7PQ495Y7 208 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 SPANXN4Q5MJ08 99 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 SNAP47Q5SQN1 464 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 MRM1Q6IN84 353 aaKnown RBP11.17□□□□□ -0.62
VTN-202ENST00000539746 SLC48A1Q6P1K1 146 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 ZFP1Q6P2D0 407 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 USP53Q70EK8 1073 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 TICAM1Q8IUC6 712 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 TMEM126BQ8IUX1 230 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 FUNDC1Q8IVP5 155 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 LRRC25Q8N386 305 aaPredicted RBP11.17□□□□□ -0.62
VTN-202ENST00000539746 FAM47BQ8NA70 645 aa11.17□□□□□ -0.62
VTN-202ENST00000539746 OR4A15Q8NGL6 344 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms