RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ZNF10P21506 573 aaPredicted RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 CERS1P27544 350 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 CCNG1P51959 295 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 RPS13P62277 151 aaKnown RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 TGM3Q08188 693 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 ABRAXAS2Q15018 415 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 NSDHLQ15738 373 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 CCDC153Q494R4 210 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 MINDY4Q4G0A6 757 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 NADK2Q4G0N4 442 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 SFT2D3Q587I9 215 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 FRG2Q64ET8 278 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 ATG14Q6ZNE5 492 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 ZNF595Q8IYB9 648 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 RDH11Q8TC12 318 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 METTL21AQ8WXB1 218 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 RGMAQ96B86 450 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 REPS1Q96D71 796 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 C11orf24Q96F05 449 aaPredicted RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 THOC3Q96J01 351 aaKnown RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 FAR2Q96K12 515 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 MAGEB10Q96LZ2 347 aaPredicted RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 FRG2BQ96QU4 278 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 CSF3RQ99062 836 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 MTERF1Q99551 399 aaKnown RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 NPAS2Q99743 824 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 MAPKAP1Q9BPZ7 522 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 RNF32Q9H0A6 362 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 EPN3Q9H201 632 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 MMP25Q9NPA2 562 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 SEMA4BQ9NPR2 832 aaPredicted RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 C19orf25Q9UFG5 118 aaPredicted RBP12.86□□□□□ -0.35
CD9-208ENST00000538834 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 ASB4Q9Y574 426 aa12.86□□□□□ -0.35
CD9-208ENST00000538834 BLACEA4D250 179 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 B4GALT2O60909 372 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 CTNSO60931 367 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 CDC123O75794 336 aaPredicted RBP12.85□□□□□ -0.35
CD9-208ENST00000538834 OTCP00480 354 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 PCNAP12004 261 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 KRT4P19013 534 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 MAOAP21397 527 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 ITGA3P26006 1051 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 CCT5P48643 541 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 NEK2P51955 445 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 SLC26A5P58743 744 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 NAA20P61599 178 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 ZNF33BQ06732 778 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 MFAP5Q13361 173 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 TERF2Q15554 542 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 PLEKHN1Q494U1 663 aaPredicted RBP12.85□□□□□ -0.35
CD9-208ENST00000538834 AGAP7PQ5VUJ5 663 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 SLC6A19Q695T7 634 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 ISLR2Q6UXK2 745 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 MILR1Q7Z6M3 343 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 APCDD1LQ8NCL9 501 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 PPP4R1Q8TF05 950 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 CCT6BQ92526 530 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 HAS2Q92819 552 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 PNPLA2Q96AD5 504 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 ANKRD9Q96BM1 317 aaPredicted RBP12.85□□□□□ -0.35
CD9-208ENST00000538834 CCDC126Q96EE4 140 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 PTCHD1Q96NR3 888 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 AGAP4Q96P64 663 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 RBCK1Q9BYM8 510 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 C12orf65Q9H3J6 166 aaKnown RBP12.85□□□□□ -0.35
CD9-208ENST00000538834 BRF2Q9HAW0 419 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 PLLPQ9Y342 182 aa12.85□□□□□ -0.35
CD9-208ENST00000538834 SYNDIG1LA6NDD5 238 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 CDK2AP1O14519 115 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 UBFD1O14562 309 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 PROM1O43490 865 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 EEDO75530 441 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 SEC24DO94855 1032 aaPredicted RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 SUPT7LO94864 414 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 OR4F21O95013 312 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 ALPPP05187 535 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 KRT15P19012 456 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 HNRNPH2P55795 449 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 AP2B1P63010 937 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 TBL3Q12788 808 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 RAPSNQ13702 412 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 EXT1Q16394 746 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 AP5B1Q2VPB7 878 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 FAM219BQ5XKK7 198 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 PAPD4Q6PIY7 484 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 METTL4Q8N3J2 472 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 TEX19Q8NA77 164 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 OR6Y1Q8NGX8 325 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 BRIX1Q8TDN6 353 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 TRPC4APQ8TEL6 797 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 SERPINI1Q99574 410 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 SORBS1Q9BX66 1292 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 FARSBQ9NSD9 589 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 VTI1BQ9UEU0 232 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 ADAM29Q9UKF5 820 aa12.84□□□□□ -0.35
CD9-208ENST00000538834 G3BP2Q9UN86 482 aaKnown RBP12.84□□□□□ -0.35
CD9-208ENST00000538834 CSAG2Q9Y5P2 127 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms