RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 C11orf24Q96F05 449 aaPredicted RBP16.32■□□□□ 0.2
CLN6-202ENST00000538696 SMIM10Q96HG1 83 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 ZBTB18Q99592 522 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 NDC1Q9BTX1 674 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 REXO4Q9GZR2 422 aaKnown RBP16.32■□□□□ 0.2
CLN6-202ENST00000538696 EFCAB1Q9HAE3 211 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 ASCL3Q9NQ33 180 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 DHCR7Q9UBM7 475 aaKnown RBP16.32■□□□□ 0.2
CLN6-202ENST00000538696 NEUROG3Q9Y4Z2 214 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 A0A0G2JN53 185 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 URADA6NGE7 173 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 CDRT15L2A8MXV6 281 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 H0YHG0 523 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 DSCR3O14972 297 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 ANGPT2O15123 496 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 ERI3O43414 337 aaKnown RBP16.31■□□□□ 0.2
CLN6-202ENST00000538696 FOXS1O43638 330 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 CPNE3O75131 537 aaKnown RBP16.31■□□□□ 0.2
CLN6-202ENST00000538696 MYO1DO94832 1006 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 NTRK1P04629 796 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 IL1RNP18510 177 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 PTX3P26022 381 aaPredicted RBP16.31■□□□□ 0.2
CLN6-202ENST00000538696 ARSFP54793 590 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 CLDN8P56748 225 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 ART3Q13508 389 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 NDUFA9Q16795 377 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 MUM1Q2TAK8 710 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 FAM214AQ32MH5 1076 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 TMEM35AQ53FP2 167 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 SPIN4Q56A73 249 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 RHBDD2Q6NTF9 364 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 ABHD17CQ6PCB6 329 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 C16orf89Q6UX73 402 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 TTLL10Q6ZVT0 673 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 PDSS2Q86YH6 399 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 METTL4Q8N3J2 472 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 METTL27Q8N6F8 245 aaPredicted RBP16.31■□□□□ 0.2
CLN6-202ENST00000538696 OR2L5Q8NG80 312 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 TSPEARQ8WU66 669 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 MCUR1Q96AQ8 359 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 VPS33AQ96AX1 596 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 METTL2AQ96IZ6 378 aaKnown RBP16.31■□□□□ 0.2
CLN6-202ENST00000538696 CLPTM1LQ96KA5 538 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 SLC46A1Q96NT5 459 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 THTPAQ9BU02 230 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 ZNF717Q9BY31 904 aaPredicted RBP16.31■□□□□ 0.2
CLN6-202ENST00000538696 ASPSCR1Q9BZE9 553 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 ULBP3Q9BZM4 244 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 B3GNT4Q9C0J1 378 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 LHX9Q9NQ69 397 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 NMRK1Q9NWW6 199 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 NDUFAF1Q9Y375 327 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 SLC22A7Q9Y694 548 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 SEC16AO15027 2179 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 NUP210LQ5VU65 1888 aa16.31■□□□□ 0.2
CLN6-202ENST00000538696 A0A0A6YYC8 382 aaPredicted RBP16.3■□□□□ 0.2
CLN6-202ENST00000538696 A0A1B0GX78 115 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 A0A1W2PP18 115 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 CCDC154A6NI56 674 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 A8MUI8 341 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 I3L1I5 382 aaPredicted RBP16.3■□□□□ 0.2
CLN6-202ENST00000538696 RTCAO00442 366 aaKnown RBP16.3■□□□□ 0.2
CLN6-202ENST00000538696 PLPP1O14494 284 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 PCDH7O60245 1069 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 DXOO77932 396 aaKnown RBP16.3■□□□□ 0.2
CLN6-202ENST00000538696 STK17BO94768 372 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 SEMA3DO95025 777 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 DLGAP3O95886 979 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 HBQ1P09105 142 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 ALOX12P18054 663 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 RBMS1P29558 406 aaKnown RBP16.3■□□□□ 0.2
CLN6-202ENST00000538696 SLC5A2P31639 672 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 RORAP35398 523 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 DGKQP52824 942 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 PLA2G16P53816 162 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 FAM53BQ14153 422 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 TLR1Q15399 786 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 TMEM164Q5U3C3 297 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 C1orf189Q5VU69 101 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 ZNF385CQ66K41 422 aaPredicted RBP16.3■□□□□ 0.2
CLN6-202ENST00000538696 TRIM40Q6P9F5 258 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 ABHD13Q7L211 337 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 COMMD6Q7Z4G1 85 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 PGAM4Q8N0Y7 254 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 EFCAB3Q8N7B9 438 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 NXPE2Q96DL1 559 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 CLIP3Q96DZ5 547 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 EGLN2Q96KS0 407 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 QRFPRQ96P65 431 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 GBP5Q96PP8 586 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 C17orf62Q9BQA9 187 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 SORBS1Q9BX66 1292 aaKnown RBP16.3■□□□□ 0.2
CLN6-202ENST00000538696 SPRY4Q9C004 299 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 SLC7A5P2Q9GIP4 190 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 CLMPQ9H6B4 373 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 WDR41Q9HAD4 459 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 SIRT5Q9NXA8 310 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 MAP10Q9P2G4 905 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 MSRB2Q9Y3D2 182 aa16.3■□□□□ 0.2
CLN6-202ENST00000538696 PCDHGA7Q9Y5G6 932 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms