RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 KNTC1P50748 2209 aa11.11□□□□□ -0.63
SPARC-207ENST00000537849 COL27A1Q8IZC6 1860 aaPredicted RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 PRSS51A0A1B0GVH4 220 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 HYKKA2RU49 373 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 CFAP73A6NFT4 308 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 C4orf47A7E2U8 309 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 FXYD1O00168 92 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 PGRMC2O15173 223 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 HOXB9P17482 250 aaPredicted RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 DDCP20711 480 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 PTPN6P29350 595 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 PGM1P36871 562 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 HPCAL1P37235 193 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 RPL3P39023 403 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 KIR3DL1P43629 444 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 GCGRP47871 477 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 TRPC1P48995 793 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 ARL4DP49703 201 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 HNRNPFP52597 415 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 ZFP36L1Q07352 338 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 COL9A2Q14055 689 aaPredicted RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 FAM53BQ14153 422 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 GPR19Q15760 415 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 MAPKAPK3Q16644 382 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 TMTC4Q5T4D3 741 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 GARNL3Q5VVW2 1013 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 C16orf89Q6UX73 402 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 TICAM1Q8IUC6 712 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 NAXDQ8IW45 347 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 PGAM4Q8N0Y7 254 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 SHISA5Q8N114 240 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 OR1L3Q8NH93 324 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 MIEF2Q96C03 454 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 ZNF501Q96CX3 271 aaPredicted RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 ZNF764Q96H86 408 aaPredicted RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 ITCHQ96J02 903 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 C10orf90Q96M02 699 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 GFM1Q96RP9 751 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 CDRT15Q96T59 188 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 HOPXQ9BPY8 73 aaPredicted RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 INPP5KQ9BT40 448 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 THTPAQ9BU02 230 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 NPLQ9BXD5 320 aaPredicted RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 BHLHE41Q9C0J9 482 aaPredicted RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 PAIP1Q9H074 479 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 IL1RL2Q9HB29 575 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 LYRM4Q9HD34 91 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 FAM120CQ9NX05 1096 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 LYARQ9NX58 379 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 NCDNQ9UBB6 729 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 FTSJ1Q9UET6 329 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 FBXW2Q9UKT8 454 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 RRP15Q9Y3B9 282 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 NAALAD2Q9Y3Q0 740 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.1□□□□□ -0.63
SPARC-207ENST00000537849 MUC6Q6W4X9 2439 aa11.1□□□□□ -0.63
SPARC-207ENST00000537849 FER1L5A0AVI2 2057 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 A0A096LPI6 279 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 TRBV5-3A0A0A0MS03 114 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 B3GALT2O43825 422 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 GUCY1B2O75343 617 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 IL1RNP18510 177 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 LIM2P55344 173 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 PLIN5Q00G26 463 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 NFYCQ13952 458 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 HEPACAMQ14CZ8 416 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 TRMT5Q32P41 509 aaKnown RBP11.09□□□□□ -0.63
SPARC-207ENST00000537849 LRIF1Q5T3J3 769 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 NDUFAF5Q5TEU4 345 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 ANXA8L1Q5VT79 327 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 C18orf63Q68DL7 685 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 NANOGP8Q6NSW7 305 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 ANKRD46Q86W74 232 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 MSRB3Q8IXL7 192 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 SLC15A3Q8IY34 581 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 DTWD1Q8N5C7 304 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 OR9A4Q8NGU2 314 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 PPCDCQ96CD2 204 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 CLPTM1LQ96KA5 538 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 CCDC74BQ96LY2 380 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 CCDC115Q96NT0 180 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 SLC39A3Q9BRY0 314 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 MMADHCQ9H3L0 296 aaPredicted RBP11.09□□□□□ -0.63
SPARC-207ENST00000537849 COPS7BQ9H9Q2 264 aaPredicted RBP11.09□□□□□ -0.63
SPARC-207ENST00000537849 NANOGQ9H9S0 305 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 SLC6A13Q9NSD5 602 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 NDE1Q9NXR1 346 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 EHD3Q9NZN3 535 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 TMEM181Q9P2C4 612 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 BTNL2Q9UIR0 455 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 SERTAD3Q9UJW9 196 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 DAPP1Q9UN19 280 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 NEUROG3Q9Y4Z2 214 aa11.09□□□□□ -0.63
SPARC-207ENST00000537849 CCDC88CQ9P219 2028 aa11.08□□□□□ -0.64
SPARC-207ENST00000537849 C1orf226A1L170 272 aa11.08□□□□□ -0.64
SPARC-207ENST00000537849 TMEM150CB9EJG8 249 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms