RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SLC29A1Q99808 456 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ELP3Q9H9T3 547 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PCDHB9Q9Y5E1 797 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 GREB1Q4ZG55 1949 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PLXND1Q9Y4D7 1925 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 GBF1Q92538 1859 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 GXYLT2A0PJZ3 443 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 CLDN5O00501 218 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 FGF3P11487 239 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 HOXD8P13378 290 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PKMP14618 531 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 CTNNB1P35222 781 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SLC25A52Q3SY17 297 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZPBP2Q6X784 338 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 KCTD20Q7Z5Y7 419 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 DCUN1D4Q92564 292 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 MGLLQ99685 303 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 VRK1Q99986 396 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 LHX5Q9H2C1 402 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RAI2Q9Y5P3 530 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ABCC6O95255 1503 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 E2F3O00716 465 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ALPPP05187 535 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 GGT5P36269 586 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 CDK6Q00534 326 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SGCGQ13326 291 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 CDNFQ49AH0 187 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 FAM111BQ6SJ93 734 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF550Q7Z398 422 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 C7orf43Q8WVR3 580 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PINK1Q9BXM7 581 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SLC38A1Q9H2H9 487 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SMCO4Q9NRQ5 59 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RPS10-NUDT3A0A1W2PQS6 291 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 OR51F1A6NGY5 319 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 A8MVJ9 347 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 WASH3PC4AMC7 463 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PRICKLE3O43900 615 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SLC22A5O76082 557 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RHOP08100 348 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 CKBP12277 381 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ADRA1BP35368 520 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SOX3P41225 446 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RPS10P46783 165 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF33BQ06732 778 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 HSDL1Q3SXM5 330 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 HMGB4Q8WW32 186 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RELTQ969Z4 430 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 MYO19Q96H55 970 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 NELL2Q99435 816 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PCDHGB2Q9Y5G2 931 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 A0A1B0GVM2 712 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 FAM230AA0A1W2PPH8 454 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 GOT2P00505 430 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RENP00797 406 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 POMCP01189 267 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 LRG1P02750 347 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 BMP2P12643 396 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 IDH3GP51553 393 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RPS27AP62979 156 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 UBA52P62987 128 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RACK1P63244 317 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 CHAF1BQ13112 559 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 C10orf62Q5T681 223 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 METTL11BQ5VVY1 283 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ALDH16A1Q8IZ83 802 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 HAS2Q92819 552 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SLC25A44Q96H78 314 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 AAASQ9NRG9 546 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 NPAP1Q9NZP6 1156 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 TRAV19A0A0A6YYK7 116 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 LYRM1O43325 122 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 LRCH4O75427 683 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SLC35F1Q5T1Q4 408 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RAET1GQ6H3X3 334 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RPS27LQ71UM5 84 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 USP21Q9UK80 565 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZFR2Q9UPR6 939 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ADGRB3O60242 1522 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 UBR2Q8IWV8 1755 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 RGPD1P0DJD0 1748 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF670-ZNF695F2Z2N8 137 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SAP18O00422 153 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 NCBP2P52298 156 aaKnown RBP eCLIP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ERVFC1P60507 584 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SNTB2Q13425 540 aaKnown RBP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 FLYWCH1Q4VC44 716 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 HHIPL2Q6UWX4 724 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF584Q8IVC4 421 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 OR2A12Q8NGT7 310 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 TMEM41AQ96HV5 264 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 IFT22Q9H7X7 185 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 NUBP2Q9Y5Y2 271 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 DISP2A7MBM2 1401 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SPATA31A6Q5VVP1 1343 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 EML5Q05BV3 1969 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ARL6IP5O75915 188 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 HTR1AP08908 422 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SPAM1P38567 509 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 NIPAL4Q0D2K0 466 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms