RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 ACTR8Q9H981 624 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 L2HGDHQ9H9P8 463 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 LYRM4Q9HD34 91 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 PRM3Q9NNZ6 103 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 DMRT3Q9NQL9 472 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 AGPAT4Q9NRZ5 378 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 KCMF1Q9P0J7 381 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 ADGRE2Q9UHX3 823 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 RNF11Q9Y3C5 154 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 TSC22D4Q9Y3Q8 395 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 POLEQ07864 2286 aa13.85□□□□□ -0.19
USP28-204ENST00000537642 HECTD1Q9ULT8 2610 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 H0YIV9 168 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 STX16-NPEPL1H3BU86 382 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 SAP18O00422 153 aaKnown RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 CLDN4O14493 209 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 OR7A17O14581 309 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 STX16O14662 325 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 UGDHO60701 494 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 SBK3P0C264 359 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 MYBL2P10244 700 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 HIST1H1TP22492 207 aaPredicted RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 PPP2R1BP30154 601 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 PIK3CBP42338 1070 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 PIK3CGP48736 1102 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 ST13P50502 369 aaKnown RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 SLC13A2Q13183 592 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 SLC29A2Q14542 456 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 DEPDC1Q5TB30 811 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 LGSNQ5TDP6 509 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 KHDRBS2Q5VWX1 349 aaKnown RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 CHSY3Q70JA7 882 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 TMEM151AQ8N4L1 468 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 SLC5A8Q8N695 610 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 FAR1Q8WVX9 515 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 MTERF1Q99551 399 aaKnown RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 MAPKAP1Q9BPZ7 522 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 MRPL57Q9BQC6 102 aaKnown RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 SORBS1Q9BX66 1292 aaKnown RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 ROGDIQ9GZN7 287 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 NOL11Q9H8H0 719 aaKnown RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 PCTPQ9UKL6 214 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 TMCO1Q9UM00 188 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 MRPS33Q9Y291 106 aaKnown RBP13.84□□□□□ -0.19
USP28-204ENST00000537642 PCDHGA11Q9Y5H2 935 aa13.84□□□□□ -0.19
USP28-204ENST00000537642 ANKUB1A6NFN9 424 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 PRAMEF2O60811 474 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 SMIM24O75264 130 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 MYO1DO94832 1006 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 SSR2P43308 183 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 TAS2R50P59544 299 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 RPS13P62277 151 aaKnown RBP13.83□□□□□ -0.2
USP28-204ENST00000537642 TUBA3CQ13748 450 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 RCN2Q14257 317 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 CPSF6Q16630 551 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP28-204ENST00000537642 AP5B1Q2VPB7 878 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 FHL5Q5TD97 284 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 TUBA3EQ6PEY2 450 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 CLNKQ7Z7G1 428 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 LGI4Q8N135 537 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 APCDD1LQ8NCL9 501 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 OR52B6Q8NGF0 335 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 WDR20Q8TBZ3 569 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 RGMAQ96B86 450 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 MTBPQ96DY7 904 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 NSUN5Q96P11 429 aaKnown RBP13.83□□□□□ -0.2
USP28-204ENST00000537642 CDK15Q96Q40 435 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 TAAR6Q96RI8 345 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 MRPL46Q9H2W6 279 aaKnown RBP13.83□□□□□ -0.2
USP28-204ENST00000537642 CDCP1Q9H5V8 836 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 ZBTB26Q9HCK0 441 aa13.83□□□□□ -0.2
USP28-204ENST00000537642 PNO1Q9NRX1 252 aaKnown RBP13.83□□□□□ -0.2
USP28-204ENST00000537642 MYOCOSA0A1B0GUC4 107 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 GABRR3A8MPY1 467 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 A8MT66 165 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 PLPP1O14494 284 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 CTNSO60931 367 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 SEMA7AO75326 666 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 CLDN9O95484 217 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 CD96P40200 585 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 CCNG1P51959 295 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 TERF2Q15554 542 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 ZRSR2Q15696 482 aaKnown RBP13.82□□□□□ -0.2
USP28-204ENST00000537642 INAQ16352 499 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 TEX35Q5T0J7 233 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 ZNF324BQ6AW86 544 aaPredicted RBP13.82□□□□□ -0.2
USP28-204ENST00000537642 OR4C11Q6IEV9 310 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 FAM180AQ6UWF9 173 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 RPS27LQ71UM5 84 aaKnown RBP13.82□□□□□ -0.2
USP28-204ENST00000537642 RPS19BP1Q86WX3 136 aaKnown RBP13.82□□□□□ -0.2
USP28-204ENST00000537642 BCORP1Q8N888 145 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 EIF1ADQ8N9N8 165 aaKnown RBP13.82□□□□□ -0.2
USP28-204ENST00000537642 ST6GALNAC3Q8NDV1 305 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 MDS2Q8NDY4 140 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 B3GNT7Q8NFL0 401 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 SUN3Q8TAQ9 357 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 PRR7Q8TB68 274 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 REPS1Q96D71 796 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 SIGLEC12Q96PQ1 595 aa13.82□□□□□ -0.2
USP28-204ENST00000537642 SLX1AQ9BQ83 275 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms