RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 RPS3AP61247 264 aaKnown RBP10.27□□□□□ -0.77
CLIP1-209ENST00000537178 HSD11B2P80365 405 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 RPA4Q13156 261 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 DGKZQ13574 1117 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 UGT8Q16880 541 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 SPANXN4Q5MJ08 99 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 PHF19Q5T6S3 580 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 C1orf94Q6P1W5 598 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF280BQ86YH2 543 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF584Q8IVC4 421 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 C7orf61Q8IZ16 206 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF420Q8TAQ5 688 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-209ENST00000537178 SLC22A8Q8TCC7 542 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 GPR22Q99680 433 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 URM1Q9BTM9 101 aaKnown RBP10.27□□□□□ -0.77
CLIP1-209ENST00000537178 DNAJC27Q9NZQ0 273 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 PCDHAC2Q9Y5I4 1007 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 MTX2O75431 263 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 IFNA10P01566 189 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 SPARCP09486 303 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 HOXD8P13378 290 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ASPAP45381 313 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 UFM1P61960 85 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ODF4Q2M2E3 257 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF792Q3KQV3 632 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 CHRFAM7AQ494W8 412 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF776Q68DI1 518 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ZDHHC24Q6UX98 284 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 LRRN1Q6UXK5 716 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 GNPDA2Q8TDQ7 276 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ARNTL2Q8WYA1 636 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 POLDIP3Q9BY77 421 aaKnown RBP10.27□□□□□ -0.77
CLIP1-209ENST00000537178 CERS4Q9HA82 394 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 YIPF1Q9Y548 306 aa10.27□□□□□ -0.77
CLIP1-209ENST00000537178 ANKRD66B4E2M5 251 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 SMAD9O15198 467 aaKnown RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 DFNA5O60443 496 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 PRKCGP05129 697 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 G6PDP11413 515 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF14P17017 642 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 DHPSP49366 369 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 PRMT2P55345 433 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 GOLGA7Q7Z5G4 137 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 KIAA1191Q96A73 305 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 RNF38Q9H0F5 515 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 SLC2A4RGQ9NR83 387 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 EXTL2Q9UBQ6 330 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 CCDC85CA6NKD9 419 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 C9IYK1 514 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 H3BUI4 141 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 PPP1R11O60927 126 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ADH5P11766 374 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 GJA9P57773 515 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 HYAL2Q12891 473 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 DHCR24Q15392 516 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 SYPL2Q5VXT5 272 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 CCDC28AQ8IWP9 274 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 UBQLNLQ8IYU4 475 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 SAMD12Q8N8I0 201 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 NAXEQ8NCW5 288 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 GALNT11Q8NCW6 608 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 OR6N2Q8NGY6 317 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 TSPEARQ8WU66 669 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 HERC2P3Q9BVR0 1158 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ZBTB26Q9HCK0 441 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 SLC7A11Q9UPY5 501 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 MAGED1Q9Y5V3 778 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 TMEM14AQ9Y6G1 99 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 URB1O60287 2271 aaKnown RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 MEN1O00255 615 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 CAPN15O75808 1086 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ACTC1P68032 377 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ACTA1P68133 377 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 MEP1AQ16819 746 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 SOWAHAQ2M3V2 549 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 NCBP2-AS2Q69YL0 99 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 UBE2Q1Q7Z7E8 422 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 TREML1Q86YW5 311 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 IFNL1Q8IU54 200 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 METTL25Q8N6Q8 603 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 RPLP0P6Q8NHW5 317 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ELP5Q8TE02 316 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 CLEC4CQ8WTT0 213 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 TSNAXQ99598 290 aaKnown RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 BEX2Q9BXY8 128 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 OR51B5Q9H339 312 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 NELFAQ9H3P2 528 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 BEX1Q9HBH7 125 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 TIGARQ9NQ88 270 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 PRODH2Q9UF12 536 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ZDHHC2Q9UIJ5 367 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 DKKL1Q9UK85 242 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 DLGAP4Q9Y2H0 992 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 TRIM64BA6NI03 449 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 AOC2O75106 756 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 DNAJB5O75953 348 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 IL33O95760 270 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 SFTPBP07988 381 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 CD3GP09693 182 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 SMPD1P17405 629 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms