RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 DNAJC13O75165 2243 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ZNF407Q9C0G0 2248 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TAPBPO15533 448 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TUBB4AP04350 444 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 GGT5P36269 586 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 MTTPP55157 894 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 LIM2P55344 173 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 BMPR2Q13873 1038 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ELAVL1Q15717 326 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CMPK2Q5EBM0 449 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CAPN12Q6ZSI9 719 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 VN1R5Q7Z5H4 357 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CLNKQ7Z7G1 428 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 GPSM1Q86YR5 675 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 GPALPP1Q8IXQ4 340 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SPATA6LQ8N4H0 392 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TSPAN17Q96FV3 270 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SMYD2Q9NRG4 433 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 DAPP1Q9UN19 280 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SAR1BQ9Y6B6 198 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CLCA3PQ9Y6N3 262 aa18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 INTS1Q8N201 2190 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1B-204ENST00000536782 USP27XA6NNY8 438 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 A8MVJ9 347 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CYR61O00622 381 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PRKNO60260 465 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PIAS1O75925 651 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 OR2J2O76002 312 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 WISP3O95389 354 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TBX6O95947 436 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 IFNA16P05015 189 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CERS1P27544 350 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 RPL21P46778 160 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TGM3Q08188 693 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CBLBQ13191 982 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 EFTUD2Q15029 972 aaKnown RBP eCLIP18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 XKR6Q5GH73 641 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CDKL4Q5MAI5 379 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SULT1C3Q6IMI6 304 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ARHGAP11AQ6P4F7 1023 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ABHD17CQ6PCB6 329 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SNX31Q8N9S9 440 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PSD4Q8NDX1 1056 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ASB15Q8WXK1 588 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CDKL2Q92772 493 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PTCD3Q96EY7 689 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 C14orf79Q96F83 325 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ENKD1Q9H0I2 346 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CAB39LQ9H9S4 337 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 LIN28AQ9H9Z2 209 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HPF1Q9NWY4 346 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TXNDC16Q9P2K2 825 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ZNF490Q9ULM2 529 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PYCARDQ9ULZ3 195 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SNX24Q9Y343 169 aa18.3■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TMEM200CA6NKL6 621 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CTNSO60931 367 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 STK16O75716 305 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CCDC166P0CW27 439 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HSPA7P48741 367 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ATP6V0D1P61421 351 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 GNG11P61952 73 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 DOC2AQ14183 400 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PDK4Q16654 411 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 FBXO48Q5FWF7 155 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TMEM211Q6ICI0 200 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ADNP2Q6IQ32 1131 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PAOXQ6QHF9 649 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 C16orf47Q6ZP98 133 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 BBOF1Q8ND07 529 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 OR52N2Q8NGI0 321 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PYROXD1Q8WU10 500 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CHTF18Q8WVB6 975 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 DAZLQ92904 295 aaKnown RBP18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ESAMQ96AP7 390 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 WDR34Q96EX3 536 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CSF3RQ99062 836 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 EFCAB11Q9BUY7 163 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TP63Q9H3D4 680 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PLSCR2Q9NRY7 297 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 DEPPQ9NTK1 212 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CD274Q9NZQ7 290 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 MYOTQ9UBF9 498 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 EML6Q6ZMW3 1958 aa18.29■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HCFC1P51610 2035 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PHGDHO43175 533 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PRAMEF4O60810 478 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PDE9AO76083 593 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CD1DP15813 335 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 STMN1P16949 149 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 KCNC1P48547 511 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 STX4Q12846 297 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 LAPTM5Q13571 262 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HIST2H2ACQ16777 129 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PAGE2BQ5JRK9 111 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PRAMEF9Q5VWM5 478 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HIST2H2AA3Q6FI13 130 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 IL20RBQ6UXL0 311 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HSDL2Q6YN16 418 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms