RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CCT6BQ92526 530 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SLC17A7Q9P2U7 560 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 A0A0G2JN53 185 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ANKDD1BA6NHY2 528 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 HMGB1P1B2RPK0 211 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 K7EPI3 171 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ERI3O43414 337 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 B4GALT2O60909 372 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ZWINTO95229 277 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 JAK1P23458 1154 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TSFMP43897 325 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 AP2B1P63010 937 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 BTG2P78543 158 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CHIT1Q13231 466 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 MRPL49Q13405 166 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PCBP2Q15366 365 aaKnown RBP eCLIP16.78■□□□□ 0.287e-10■■■■□ 21.5
TNFRSF1A-209ENST00000536717 TLR1Q15399 786 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TBCCQ15814 346 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PAPD4Q6PIY7 484 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 QSOX2Q6ZRP7 698 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CA13Q8N1Q1 262 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 HAS2Q92819 552 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 EFCAB11Q9BUY7 163 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PLA2G3Q9NZ20 509 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ANGPTL3Q9Y5C1 460 aa16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 COPG1Q9Y678 874 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-209ENST00000536717 FAM227AF5H4B4 570 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 G3V2L1 256 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SIX3O95343 332 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 RNH1P13489 461 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 EPB42P16452 691 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 EEF1DP29692 281 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CASP2P42575 452 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PIK3CGP48736 1102 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PRKAA2P54646 552 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 BTN3A2P78410 334 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ARG2P78540 354 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 IRF8Q02556 426 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TTMPQ5BVD1 217 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 FAM26EQ8N5C1 309 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 LPAR4Q99677 370 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SLC29A3Q9BZD2 475 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 RHBGQ9H310 441 aa16.77■□□□□ 0.28
TNFRSF1A-209ENST00000536717 DYTNA2CJ06 578 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 F10P00742 488 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TNFSF10P50591 281 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 HERVK_113P63132 956 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PCDH1Q08174 1060 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 LAPTM5Q13571 262 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 RUNX2Q13950 521 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 HSP90B2PQ58FF3 399 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 H3F3CQ6NXT2 135 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TEX9Q8N6V9 391 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 OR2L5Q8NG80 312 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 FAR2Q96K12 515 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PTCHD1Q96NR3 888 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 QRFPRQ96P65 431 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ERVK-6Q9BXR3 956 aa16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 REXO4Q9GZR2 422 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-209ENST00000536717 IGKV3D-11A0A0A0MRZ8 115 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TMEM120BA0PK00 339 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PSMD12O00232 456 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 E2F3O00716 465 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PRMT3O60678 531 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 WDPCPO95876 746 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 IMPDH1P20839 514 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MAOAP21397 527 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PLA2G16P53816 162 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SLC18A1P54219 525 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 OR4D2P58180 307 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ACTN3Q08043 901 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ASPHQ12797 758 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 GTF2H2Q13888 395 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NR6A1Q15406 480 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 EXT1Q16394 746 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PAGE2BQ5JRK9 111 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 GTF2H2CQ6P1K8 395 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ABHD17CQ6PCB6 329 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 M1APQ8TC57 530 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SREK1Q8WXA9 508 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NPAS2Q99743 824 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NPLQ9BXD5 320 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 C1QTNF3Q9BXJ4 246 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 RNF32Q9H0A6 362 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MMP25Q9NPA2 562 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NECTIN3Q9NQS3 549 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 OXSMQ9NWU1 459 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NKIRAS1Q9NYS0 192 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TCRBV16S1A1N1A0A5B0 115 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 LRRC14BA6NHZ5 514 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SUPT7LO94864 414 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CBX6O95503 412 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 RPS17P08708 135 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 HPDP32754 393 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ETV4P43268 484 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SLC26A5P58743 744 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ZNF33BQ06732 778 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PCLAFQ15004 111 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 EIF2S3LQ2VIR3 472 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ABHD17BQ5VST6 288 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms