RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 A0A088AWK7 358 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 ESPNB1AK53 854 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 UGDHO60701 494 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 EEDO75530 441 aaKnown RBP12.33□□□□□ -0.44
PRKDC-206ENST00000536429 SCELO95171 688 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 SLU7O95391 586 aaKnown RBP12.33□□□□□ -0.44
PRKDC-206ENST00000536429 WDPCPO95876 746 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 ICAM2P13598 275 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 ZNF10P21506 573 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-206ENST00000536429 HIST1H1TP22492 207 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-206ENST00000536429 ARL1P40616 181 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-206ENST00000536429 PIK3CBP42338 1070 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 SSR2P43308 183 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 UQCRFS1P47985 274 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 TGM3Q08188 693 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 TMEM35AQ53FP2 167 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 UNC50Q53HI1 259 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 CHSY3Q70JA7 882 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 NFAM1Q8NET5 270 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-206ENST00000536429 OR4F6Q8NGB9 312 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 M1APQ8TC57 530 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 ACMSDQ8TDX5 336 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 TRPC4APQ8TEL6 797 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 SNRNP40Q96DI7 357 aaKnown RBP12.33□□□□□ -0.44
PRKDC-206ENST00000536429 TMEM237Q96Q45 408 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 LMF1Q96S06 567 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 TBCDQ9BTW9 1192 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 NTMT1Q9BV86 223 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 C1QTNF3Q9BXJ4 246 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 KCNK13Q9HB14 408 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 MMP25Q9NPA2 562 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 PRTFDC1Q9NRG1 225 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 FBXW2Q9UKT8 454 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 TSC22D4Q9Y3Q8 395 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 MMACHCQ9Y4U1 282 aa12.33□□□□□ -0.44
PRKDC-206ENST00000536429 SCN2AQ99250 2005 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 SAGE2PA6NJ88 616 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 PRKRAO75569 313 aaKnown RBP12.32□□□□□ -0.44
PRKDC-206ENST00000536429 UQCRHP07919 91 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 SERPINB1P30740 379 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 HPDP32754 393 aaPredicted RBP12.32□□□□□ -0.44
PRKDC-206ENST00000536429 ARG2P78540 354 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 ID2Q02363 134 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 ZNF33BQ06732 778 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 ZNF169Q14929 603 aaPredicted RBP12.32□□□□□ -0.44
PRKDC-206ENST00000536429 EXT1Q16394 746 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 AP5B1Q2VPB7 878 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 ZNF678Q5SXM1 525 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 OR4C11Q6IEV9 310 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 H3F3CQ6NXT2 135 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 TDRPQ86YL5 185 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 CRLF3Q8IUI8 442 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 IQCKQ8N0W5 287 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 ELP5Q8TE02 316 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 AENQ8WTP8 325 aaKnown RBP12.32□□□□□ -0.44
PRKDC-206ENST00000536429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRKDC-206ENST00000536429 CLMPQ9H6B4 373 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 LYRM4Q9HD34 91 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 PNO1Q9NRX1 252 aaKnown RBP12.32□□□□□ -0.44
PRKDC-206ENST00000536429 FARSBQ9NSD9 589 aaKnown RBP12.32□□□□□ -0.44
PRKDC-206ENST00000536429 ASF1BQ9NVP2 202 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 MAP10Q9P2G4 905 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 ADGRE2Q9UHX3 823 aa12.32□□□□□ -0.44
PRKDC-206ENST00000536429 FLNBO75369 2602 aaKnown RBP12.31□□□□□ -0.44
PRKDC-206ENST00000536429 WASHC1A8K0Z3 465 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 TMPRSS11DO60235 418 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 LDB3O75112 727 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 MYO1DO94832 1006 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 GBAP04062 536 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 GNLYP22749 145 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 ATP5F1P24539 256 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-206ENST00000536429 BSGP35613 385 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 TNFSF10P50591 281 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 RAP1GDS1P52306 607 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 HNRNPH2P55795 449 aaKnown RBP12.31□□□□□ -0.44
PRKDC-206ENST00000536429 HSD17B7P56937 341 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 HERVK_113P63132 956 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 CLCQ05315 142 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 SLC13A2Q13183 592 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 SLAMF1Q13291 335 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 TLR1Q15399 786 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 ERCC6LQ2NKX8 1250 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 SGO1Q5FBB7 561 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 TCHHL1Q5QJ38 904 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-206ENST00000536429 ACER2Q5QJU3 275 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 ABHD17BQ5VST6 288 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 FRG2Q64ET8 278 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 C18orf63Q68DL7 685 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 MILR1Q7Z6M3 343 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 ZNF595Q8IYB9 648 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 BEST3Q8N1M1 668 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 SRFBP1Q8NEF9 429 aaKnown RBP12.31□□□□□ -0.44
PRKDC-206ENST00000536429 OR1N1Q8NGS0 311 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 ADAMTS18Q8TE60 1221 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 UCN3Q969E3 161 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 RGMAQ96B86 450 aa12.31□□□□□ -0.44
PRKDC-206ENST00000536429 ANKRD9Q96BM1 317 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-206ENST00000536429 REPS1Q96D71 796 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms