RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 IL10P22301 178 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 OTX2P32243 289 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 TSFMP43897 325 aaKnown RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 EMP2P54851 167 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 HNRNPH2P55795 449 aaKnown RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 RAB38P57729 211 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 RAE1P78406 368 aaKnown RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 BTG2P78543 158 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 RHAGQ02094 409 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 BTKQ06187 659 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 COL28A1Q2UY09 1125 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 MINDY4Q4G0A6 757 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 CRTC2Q53ET0 693 aaPredicted RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 FAAH2Q6GMR7 532 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 RNF165Q6ZSG1 346 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 Q6ZSR9 355 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 MED25Q71SY5 747 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 COMMD6Q7Z4G1 85 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 NUDT13Q86X67 352 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 C1orf52Q8N6N3 182 aaKnown RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 FAM47BQ8NA70 645 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 TWIST2Q8WVJ9 160 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 SNRNP27Q8WVK2 155 aaKnown RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 ZNF75CPQ92670 426 aaPredicted RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 OR1F2PQ96R84 312 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 VN1R1Q9GZP7 353 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 PRORYQ9H606 182 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 MANSC1Q9H8J5 431 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 LYRM4Q9HD34 91 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 PNPOQ9NVS9 261 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 HAO1Q9UJM8 370 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 FBXW2Q9UKT8 454 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.37□□□□□ -0.43
TMEM258-202ENST00000535042 RAP2CQ9Y3L5 183 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 ATG4BQ9Y4P1 393 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 ASB4Q9Y574 426 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 HS3ST3B1Q9Y662 390 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 PCSK5Q92824 1860 aa12.37□□□□□ -0.43
TMEM258-202ENST00000535042 MASP2O00187 686 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 SOCS6O14544 535 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 PIP5K1BO14986 540 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 JUNP05412 331 aaKnown RBP12.36□□□□□ -0.43
TMEM258-202ENST00000535042 HEXBP07686 556 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 FAM58BPP0C7Q3 252 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 MMP11P24347 488 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 MC1RQ01726 317 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 OCRLQ01968 901 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 TUBB8Q3ZCM7 444 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 MFSD4BQ5TF39 518 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 C18orf63Q68DL7 685 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 RIPOR1Q6ZS17 1223 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 MRGPREQ86SM8 312 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 TRIM42Q8IWZ5 723 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 AMER2Q8N7J2 671 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 ZSCAN1Q8NBB4 408 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 RAB3IL1Q8TBN0 382 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 TSLPQ969D9 159 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 UCN3Q969E3 161 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 C8orf44Q96CB5 159 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 C11orf24Q96F05 449 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-202ENST00000535042 C3orf30Q96M34 536 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 ILKAPQ9H0C8 392 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-202ENST00000535042 SEMA3GQ9NS98 782 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 INTS9Q9NV88 658 aaKnown RBP12.36□□□□□ -0.43
TMEM258-202ENST00000535042 THAP1Q9NVV9 213 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 NMRK1Q9NWW6 199 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 AHSPQ9NZD4 102 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 ADAM29Q9UKF5 820 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 CLDN16Q9Y5I7 305 aa12.36□□□□□ -0.43
TMEM258-202ENST00000535042 A0A1W2PR48 441 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 WASHC1A8K0Z3 465 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 NPIPB8E9PQR5 432 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 TGFBR3LH3BV60 316 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 PSMD12O00232 456 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-202ENST00000535042 SLC28A1O00337 649 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 KLF11O14901 512 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 ALOX12BO75342 701 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 SKAP2O75563 359 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-202ENST00000535042 PRKRAO75569 313 aaKnown RBP12.35□□□□□ -0.43
TMEM258-202ENST00000535042 RSL1D1O76021 490 aaKnown RBP12.35□□□□□ -0.43
TMEM258-202ENST00000535042 CPN2P22792 545 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 RPL14P50914 215 aaKnown RBP12.35□□□□□ -0.43
TMEM258-202ENST00000535042 ATP1A4Q13733 1029 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 KIAA0040Q15053 153 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 IMPG1Q17R60 797 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 DEFB109BQ30KR1 87 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 XKR7Q5GH72 579 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 SPDYAQ5MJ70 313 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 CCNYL2Q5T2Q4 361 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 ATG16L1Q676U5 607 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 TMEM205Q6UW68 189 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 KIRREL2Q6UWL6 708 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 LANCL3Q6ZV70 420 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 GPR180Q86V85 440 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 RAB43Q86YS6 212 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 DDIASQ8IXT1 998 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 PLPP5Q8NEB5 264 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 MED4Q9NPJ6 270 aa12.35□□□□□ -0.43
TMEM258-202ENST00000535042 NECTIN3Q9NQS3 549 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms