RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ECHDC3Q96DC8 303 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 AARSD1Q9BTE6 412 aaKnown RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 MED28Q9H204 178 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 TTYH1Q9H313 450 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 FBXO8Q9NRD0 319 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 FBXL12Q9NXK8 326 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 MKLN1Q9UL63 735 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 HS3ST2Q9Y278 367 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 RP1L1Q8IWN7 2480 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 TRAV6A0A075B6T7 132 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 SHOXO15266 292 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 ECDO95905 644 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 MPOP05164 745 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 PIGAP37287 484 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 PIK3CBP42338 1070 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 MTPNP58546 118 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 SH3BP2P78314 561 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 TEKQ02763 1124 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 HYAL1Q12794 435 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 TSNQ15631 228 aaKnown RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 PDE12Q6L8Q7 609 aaKnown RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 SERPINA13PQ6UXR4 307 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 SYVN1Q86TM6 617 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 CACUL1Q86Y37 369 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 LACC1Q8IV20 430 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 VRK3Q8IV63 474 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 SLC34A3Q8N130 599 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 DNAJB8Q8NHS0 232 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 WDR36Q8NI36 951 aaKnown RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 ZFAND1Q8TCF1 268 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 C2CD4CQ8TF44 421 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 TMEM80Q96HE8 168 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 ATOH8Q96SQ7 321 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 MAFFQ9ULX9 164 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 SPENQ96T58 3664 aaKnown RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 NPEPPSL1A6NEC2 478 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 K7ESM1 405 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 LEFTY1O75610 366 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 CDK1P06493 297 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 SUOXP51687 545 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 SLC9A5Q14940 896 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 CHRNA6Q15825 494 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 TATDN3Q17R31 274 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 ATP13A5Q4VNC0 1218 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 ZMAT1Q5H9K5 638 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 VITQ6UXI7 678 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 HSD11B1LQ7Z5J1 315 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 GPR65Q8IYL9 337 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 OR2AP1Q8NGE2 309 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 GOT1L1Q8NHS2 421 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 ASB16Q96NS5 453 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 TUBB1Q9H4B7 451 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 PRMT8Q9NR22 394 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-216ENST00000534765 ACTR10Q9NZ32 417 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 CLEC1BQ9P126 229 aa8.67□□□□□ -1.02
SF3B2-216ENST00000534765 TRIOBPQ9H2D6 2365 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 FABP12A6NFH5 140 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 LINC00587B1AMM8 73 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 PRR23D1E9PI22 279 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 LATS1O95835 1130 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 IFNA7P01567 189 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 RPLP0P05388 317 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 PRR23D2P0DMB1 279 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ACADLP28330 430 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 RAPSNQ13702 412 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 RFTN1Q14699 578 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 UNC50Q53HI1 259 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ZRANB3Q5FWF4 1079 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 CYB5R2Q6BCY4 276 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ZFP82Q8N141 532 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 FNDC5Q8NAU1 212 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 SETD9Q8NE22 299 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 EML4Q9HC35 981 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 CD93Q9NPY3 652 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 NIT2Q9NQR4 276 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 NKIRAS2Q9NYR9 191 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 RAB23Q9ULC3 237 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 DENND4AQ7Z401 1863 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 SDHDO14521 159 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 SULT1B1O43704 296 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 DIRAS1O95057 198 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 HMGCLP35914 325 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ERVK-25P63136 954 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 AANATQ16613 207 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 DUSP6Q16828 381 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 CTU2Q2VPK5 515 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ATP6AP1LQ52LC2 224 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ARSIQ5FYB1 569 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 MPP7Q5T2T1 576 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 PIWIL4Q7Z3Z4 852 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 TBC1D19Q8N5T2 526 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 SMG7Q92540 1137 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 CDK15Q96Q40 435 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 MYADMQ96S97 322 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ZFP14Q9HCL3 533 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ELOVL2Q9NXB9 296 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 B3GNT2Q9NY97 397 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 FBXO10Q9UK96 956 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 MRPS23Q9Y3D9 190 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms