RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TEKT4	Q8WW24	435 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ART4	Q93070	314 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TAAR8	Q969N4	342 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FER1L6-AS2	Q96M78	137 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CFAP57	Q96MR6	1250 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NAA11	Q9BSU3	229 aa	Predicted RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	HGH1	Q9BTY7	390 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FAM129A	Q9BZQ8	928 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NOX4	Q9NPH5	578 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	YAE1D1	Q9NRH1	226 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DNAJC17	Q9NVM6	304 aa	Known RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	B3GALT5	Q9Y2C3	310 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PTGDR2	Q9Y5Y4	395 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MDC1	Q14676	2089 aa	Known RBP	4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NEDD4	P46934	1319 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442	STK36	Q9NRP7	1315 aa		4.21	□□□□□ -1.74
ECHDC1-223	ENST00000534442		A0A0U1RQS6	177 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ARGFX	A6NJG6	315 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SOCS6	O14544	535 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SLC9A3R1	O14745	358 aa	Predicted RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TNFRSF13B	O14836	293 aa	Predicted RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CLGN	O14967	610 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ASAP2	O43150	1006 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TSPAN1	O60635	241 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TBCA	O75347	108 aa	Known RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SYF2	O95926	243 aa	Known RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CH25H	O95992	272 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PSG1	P11464	419 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	HMGA1	P17096	107 aa	Known RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NR2F2	P24468	414 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CA7	P43166	264 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RFX2	P48378	723 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	AMT	P48728	403 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CSE1L	P55060	971 aa	Known RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TAS2R38	P59533	333 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NCBP1	Q09161	790 aa	Known RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GPR17	Q13304	367 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ETFDH	Q16134	617 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SNAPC1	Q16533	368 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ZNF542P	Q5EBM4	170 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GLRA4	Q5JXX5	417 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	C18orf63	Q68DL7	685 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SUSD1	Q6UWL2	747 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	COLCA1	Q6ZS62	124 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	IRF2BP2	Q7Z5L9	587 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CUZD1	Q86UP6	607 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	IQCH	Q86VS3	1027 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CDR2L	Q86X02	465 aa	Predicted RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CDC20B	Q86Y33	519 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	KBTBD3	Q8NAB2	608 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ACVR1C	Q8NER5	493 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TSPAN14	Q8NG11	270 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OR2T3	Q8NH03	318 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DENND1A	Q8TEH3	1009 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	WFIKKN2	Q8TEU8	576 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SHC3	Q92529	594 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RPL36AL	Q969Q0	106 aa	Known RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SPATA17	Q96L03	361 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SMC6	Q96SB8	1091 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SLX1A	Q9BQ83	275 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DDA1	Q9BW61	102 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ING2	Q9H160	280 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RAD21L1	Q9H4I0	556 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GCNT4	Q9P109	453 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	AGO1	Q9UL18	857 aa	Known RBP	4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	EXOC6B	Q9Y2D4	811 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RNF215	Q9Y6U7	377 aa		4.2	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CIT	O14578	2027 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	LYST	Q99698	3801 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CSMD3	Q7Z407	3707 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	IGKV6-21	A0A0C4DH24	114 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	hDV102S1	A0JD36	115 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	WDR91	A4D1P6	747 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442		J3QR06	171 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ANKRD28	O15084	1053 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CEACAM4	O75871	244 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PC	P11498	1178 aa	Known RBP	4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PTAFR	P25105	342 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DLST	P36957	453 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CLDN20	P56880	219 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SEC61B	P60468	96 aa	Known RBP	4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DMPK	Q09013	629 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OVGP1	Q12889	678 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RALGDS	Q12967	914 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ENPP2	Q13822	863 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	KRT33B	Q14525	404 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CTF1	Q16619	201 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MEP1A	Q16819	746 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	POM121L1P	Q3SYA9	428 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TTC31	Q49AM3	519 aa	Predicted RBP	4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CEP55	Q53EZ4	464 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	C6orf163	Q5TEZ5	329 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	LIPN	Q5VXI9	398 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CST9LP1	Q5W188	147 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	WDR73	Q6P4I2	378 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TRAT1	Q6PIZ9	186 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	BRAT1	Q6PJG6	821 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	IQCA1	Q86XH1	822 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ZNF595	Q8IYB9	648 aa		4.19	□□□□□ -1.74

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