RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 ABHD17CQ6PCB6 329 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 RIPOR1Q6ZS17 1223 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 C1orf52Q8N6N3 182 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 PROKR1Q8TCW9 393 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 CHTF18Q8WVB6 975 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 N4BP2L2Q92802 583 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 SPDL1Q96EA4 605 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 CMKLR1Q99788 373 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 HOPXQ9BPY8 73 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 C1orf50Q9BV19 199 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 STRADBQ9C0K7 418 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 POLR1BQ9H9Y6 1135 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 PRDM7Q9NQW5 492 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 SLC7A8Q9UHI5 535 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 PCDHGA8Q9Y5G5 932 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 SEC16AO15027 2179 aa12.72□□□□□ -0.37
TRAPPC4-214ENST00000533632 C1QTNF9BB2RNN3 333 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 DNAJB6O75190 326 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 EEDO75530 441 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 SEMA3DO95025 777 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 GBAP04062 536 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 C1QTNF9P0C862 333 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 CD1EP15812 388 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 IL1RNP18510 177 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 BSGP35613 385 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 MC2RQ01718 297 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 EIF3IQ13347 325 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 SPATS1Q496A3 300 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 TCTE1Q5JU00 501 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 PWWP2BQ6NUJ5 590 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 IGF2-ASQ6U949 168 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 COMMD6Q7Z4G1 85 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 METTL4Q8N3J2 472 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 SLC38A9Q8NBW4 561 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 OR2L5Q8NG80 312 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 GAL3ST3Q96A11 431 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 QRFPRQ96P65 431 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 NPAS2Q99743 824 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 SLC52A3Q9NQ40 469 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 IRAK4Q9NWZ3 460 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 BCAP29Q9UHQ4 241 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 BAIAP2L1Q9UHR4 511 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 LEF1Q9UJU2 399 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 CROTQ9UKG9 612 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 DLGAP4Q9Y2H0 992 aa12.71□□□□□ -0.37
TRAPPC4-214ENST00000533632 ZZEF1O43149 2961 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 HYKKA2RU49 373 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 CCDC154A6NI56 674 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 B4E171 279 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 ANKRD28O15084 1053 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 ZNF749O43361 778 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 FOXS1O43638 330 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 BRINP1O60477 761 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 FGF5P12034 268 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 TSPAN7P41732 249 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 STXBP1P61764 594 aaKnown RBP12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 UFM1P61960 85 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 FOXK2Q01167 660 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 GRM7Q14831 915 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 DEFB134Q4QY38 66 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 TMEM35AQ53FP2 167 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 MANEAQ5SRI9 462 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 OR8K5Q8NH50 307 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 SLC45A3Q96JT2 553 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 FCRL1Q96LA6 429 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 SLC46A1Q96NT5 459 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 CDRT15Q96T59 188 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 EBPLQ9BY08 206 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 FANCEQ9HB96 536 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 FBXO8Q9NRD0 319 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 DHCR7Q9UBM7 475 aaKnown RBP12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 SERTAD3Q9UJW9 196 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 RARRES3Q9UL19 164 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 MAPRE3Q9UPY8 281 aa12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 POLR3HQ9Y535 204 aaPredicted RBP12.71□□□□□ -0.38
TRAPPC4-214ENST00000533632 SCN2AQ99250 2005 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 CFAP47Q6ZTR5 3102 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 ZNF860A6NHJ4 632 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 A8MUI8 341 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 CDRT15L2A8MXV6 281 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 C9orf172C9J069 976 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 CFLARO15519 480 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 IL6P05231 212 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 ZNF28P17035 718 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 ALOX12P18054 663 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 CAPN3P20807 821 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 CERS1P27544 350 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 TPP2P29144 1249 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 CLNS1AP54105 237 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 NME5P56597 212 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 ACTR3P61158 418 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 PSME3P61289 254 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 ACSM2AQ08AH3 577 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 IL11RAQ14626 422 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 VPS26BQ4G0F5 336 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 PIGGQ5H8A4 983 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 C1orf146Q5VVC0 180 aa12.7□□□□□ -0.38
TRAPPC4-214ENST00000533632 ACSM2BQ68CK6 577 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms