RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 SEMA3DO95025 777 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 ATP5A1P25705 553 aaKnown RBP12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 FOXL2P58012 376 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 CSTF3Q12996 717 aaKnown RBP12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 NKG7Q16617 165 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 MLIPQ5VWP3 458 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 OR52E8Q6IFG1 317 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 TRIM40Q6P9F5 258 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 DNAJC14Q6Y2X3 702 aaPredicted RBP12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 ENDOVQ8N8Q3 282 aaKnown RBP12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 SRFBP1Q8NEF9 429 aaKnown RBP12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 ZNF75CPQ92670 426 aaPredicted RBP12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 RGMAQ96B86 450 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 CNTNAP3BQ96NU0 1288 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 KCNC2Q96PR1 638 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 SPSB2Q99619 263 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 CNTNAP3Q9BZ76 1288 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 TGIF2Q9GZN2 237 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 MANSC1Q9H8J5 431 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 DMXL2Q8TDJ6 3036 aa12.02□□□□□ -0.48
RPUSD4-208ENST00000533628 IGF2RP11717 2491 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 CHST10O43529 356 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 PTPN4P29074 926 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 EFNA3P52797 238 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 MTTPP55157 894 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 OLR1P78380 273 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 TLE3Q04726 772 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 SH2D4BQ5SQS7 431 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 FAM69BQ5VUD6 431 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 OR4C11Q6IEV9 310 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 MED25Q71SY5 747 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 ZC3H7AQ8IWR0 971 aaKnown RBP12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 CA13Q8N1Q1 262 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 METTL4Q8N3J2 472 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 ZNF781Q8N8C0 355 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 OR51Q1Q8NH59 317 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 LZICQ8WZA0 190 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 C11orf24Q96F05 449 aaPredicted RBP12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 SERINC2Q96SA4 455 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 NPLQ9BXD5 320 aaPredicted RBP12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 CCDC134Q9H6E4 229 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 DDX31Q9H8H2 851 aaKnown RBP12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 WDR54Q9H977 334 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 GPN2Q9H9Y4 310 aaPredicted RBP12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 KCMF1Q9P0J7 381 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 HCN3Q9P1Z3 774 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 TRPC4Q9UBN4 977 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 RAP2CQ9Y3L5 183 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 MRPS18BQ9Y676 258 aaKnown RBP12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 CHD8Q9HCK8 2581 aa12.02□□□□□ -0.49
RPUSD4-208ENST00000533628 C9J4A7 227 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 NPIPB8E9PQR5 432 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 RRP8O43159 456 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 EEDO75530 441 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 BMP10O95393 424 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 HSPA4LO95757 839 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 KRT16P08779 473 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 HIST1H1TP22492 207 aaPredicted RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 CERS1P27544 350 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 ITPKBP27987 946 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 TSFMP43897 325 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 RPS18P62269 152 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 HMGCS1Q01581 520 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 OCRLQ01968 901 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 TGM3Q08188 693 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 VWA2Q5GFL6 755 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 MRM1Q6IN84 353 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 Q6ZSR9 355 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 ASRGL1Q7L266 308 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 ACOT4Q8N9L9 421 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 STT3BQ8TCJ2 826 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 CHTF18Q8WVB6 975 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 SLC45A3Q96JT2 553 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 FAR2Q96K12 515 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 DCBLD2Q96PD2 775 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 CCNL2Q96S94 520 aaPredicted RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 MRPL1Q9BYD6 325 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 FAM192AQ9GZU8 254 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 MKKSQ9NPJ1 570 aaPredicted RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 INTS9Q9NV88 658 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 THAP1Q9NVV9 213 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 ZNF282Q9UDV7 671 aaPredicted RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 KCND3Q9UK17 655 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 TCFL5Q9UL49 500 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 PTGDR2Q9Y5Y4 395 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 CCDC88CQ9P219 2028 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 A0A0A6YYD5 115 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 CRCPO75575 148 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 UBOX5O94941 541 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 UMODP07911 640 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 ZGLP1P0C6A0 271 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 RPS15P62841 145 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 BNIP1Q12981 228 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 AP5B1Q2VPB7 878 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 TMEM154Q6P9G4 183 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 LAPTM4BQ86VI4 370 aa12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 ZCCHC7Q8N3Z6 543 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-208ENST00000533628 OR2T11Q8NH01 316 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms