RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 FAM227AF5H4B4 570 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 PHGDHO43175 533 aaKnown RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 ALDOAP04075 364 aaKnown RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 CCDC166P0CW27 439 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 CD1DP15813 335 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 HNRNPH1P31943 449 aaKnown RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 CA7P43166 264 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 SLC12A2P55011 1212 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 RIPPLY3P57055 190 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 TAS2R50P59544 299 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 STXBP1P61764 594 aaKnown RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 RUNX2Q13950 521 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 ZKSCAN8Q15776 578 aaPredicted RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 ADPRMQ3LIE5 342 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 ZNF468Q5VIY5 522 aaPredicted RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 VN1R5Q7Z5H4 357 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 TRABD2AQ86V40 505 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 RPS19BP1Q86WX3 136 aaKnown RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 SCUBE1Q8IWY4 988 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 KRT78Q8N1N4 520 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 TCAIMQ8N3R3 496 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 GOLGA6L1Q8N7Z2 621 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 TMEM178AQ8NBL3 297 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 APCDD1LQ8NCL9 501 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 ARL8AQ96BM9 186 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 TLCD1Q96CP7 247 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 MS4A6EQ96DS6 147 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 TSPAN17Q96FV3 270 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 SEC16BQ96JE7 1060 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 UBXN10Q96LJ8 280 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 FRMD6Q96NE9 622 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 NPLQ9BXD5 320 aaPredicted RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 CAPS2Q9BXY5 557 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 PITHD1Q9GZP4 211 aaPredicted RBP10.58□□□□□ -0.72
CLCF1-202ENST00000533438 EHD1Q9H4M9 534 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 MED4Q9NPJ6 270 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 KLHL1Q9NR64 748 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 SENP1Q9P0U3 644 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 MMACHCQ9Y4U1 282 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 CLDN16Q9Y5I7 305 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 ACTL7BQ9Y614 415 aa10.58□□□□□ -0.72
CLCF1-202ENST00000533438 CSMD2Q7Z408 3487 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 DCHS2Q6V1P9 2916 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 TRGV8A0A0C4DH27 118 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 A0A0G2JN53 185 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 PSMD12O00232 456 aaPredicted RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ERI3O43414 337 aaKnown RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 H2AFYO75367 372 aaKnown RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 CLEC3AO75596 197 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 SP1P08047 785 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 CD46P15529 392 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 STMN1P16949 149 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 KRT15P19012 456 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 CD22P20273 847 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 TPP2P29144 1249 aaPredicted RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 EEF1DP29692 281 aaKnown RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 TRHRP34981 398 aaPredicted RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 SERPINB8P50452 374 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 MLF1P58340 268 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ATP6V0D1P61421 351 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 BTN3A2P78410 334 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 E2F2Q14209 437 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 OR4D1Q15615 310 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 TTMPQ5BVD1 217 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 FBXO48Q5FWF7 155 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 SULT1C3Q6IMI6 304 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 SH2D5Q6ZV89 423 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 GALNTL5Q7Z4T8 443 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 CCDC91Q7Z6B0 441 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ZNF227Q86WZ6 799 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 GPSM1Q86YR5 675 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 SIAH3Q8IW03 269 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 HORMAD2Q8N7B1 307 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 PDPRQ8NCN5 879 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ACMSDQ8TDX5 336 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 THAP3Q8WTV1 239 aaPredicted RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ITLN2Q8WWU7 325 aaPredicted RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ESAMQ96AP7 390 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ZBTB9Q96C00 473 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 WDR34Q96EX3 536 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 CCDC120Q96HB5 630 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ATP6V1G3Q96LB4 118 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 GPR137Q96N19 417 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 QRFPRQ96P65 431 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 RHBGQ9H310 441 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 CENPHQ9H3R5 247 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 CNOT10Q9H9A5 744 aaKnown RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 SNX15Q9NRS6 342 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 DNAJC11Q9NVH1 559 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 WWOXQ9NZC7 414 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 LRFN1Q9P244 771 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 PTBP2Q9UKA9 531 aaKnown RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ZNF490Q9ULM2 529 aaPredicted RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 PPIEQ9UNP9 301 aaKnown RBP10.57□□□□□ -0.72
CLCF1-202ENST00000533438 ZNF835Q9Y2P0 537 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 GTF3C1Q12789 2109 aa10.57□□□□□ -0.72
CLCF1-202ENST00000533438 A0A1W2PPM1 405 aa10.56□□□□□ -0.72
CLCF1-202ENST00000533438 ANKDD1BA6NHY2 528 aa10.56□□□□□ -0.72
CLCF1-202ENST00000533438 A8MUA0 341 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms