RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 YOD1Q5VVQ6 348 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-205ENST00000531303 C18orf63Q68DL7 685 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 MRM1Q6IN84 353 aaKnown RBP18.01■□□□□ 0.47
SMPD1-205ENST00000531303 ANKRD26P1Q6NSI1 321 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CEACAM20Q6UY09 585 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CLNKQ7Z7G1 428 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CA13Q8N1Q1 262 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 TAAR9Q96RI9 348 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 RBCK1Q9BYM8 510 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 ULBP3Q9BZM4 244 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 MYNNQ9NPC7 610 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 LYARQ9NX58 379 aaKnown RBP18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CCDC167Q9P0B6 97 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CDC14AQ9UNH5 594 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CAPN7Q9Y6W3 813 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 A0A1W2PR48 441 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 GLOD5A6NK44 160 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 ANKRD28O15084 1053 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CPN2P22792 545 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 PIK3R1P27986 724 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 IL12AP29459 219 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 RAB15P59190 212 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 SHC2P98077 582 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 EIF3IQ13347 325 aaKnown RBP18.01■□□□□ 0.47
SMPD1-205ENST00000531303 FAM71E1Q6IPT2 247 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 RHBDD2Q6NTF9 364 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 GK5Q6ZS86 529 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 TREML1Q86YW5 311 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 FAM47BQ8NA70 645 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 PROKR1Q8TCW9 393 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 FAM122AQ96E09 287 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 PEX11GQ96HA9 241 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 ZBTB18Q99592 522 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 CCDC106Q9BWC9 280 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 ZNF304Q9HCX3 659 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 ZIM2Q9NZV7 527 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 KCMF1Q9P0J7 381 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 DAPP1Q9UN19 280 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 PCDHB3Q9Y5E6 796 aa18.01■□□□□ 0.47
SMPD1-205ENST00000531303 WASHC1A8K0Z3 465 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 FAM227AF5H4B4 570 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 GUCY1B2O75343 617 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 HBQ1P09105 142 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 FBLP22087 321 aaKnown RBP18■□□□□ 0.47
SMPD1-205ENST00000531303 HPCAL1P37235 193 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 TRA2BP62995 288 aaKnown RBP18■□□□□ 0.47
SMPD1-205ENST00000531303 KLC1Q07866 573 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 PGS1Q32NB8 556 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 NDUFAF5Q5TEU4 345 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 ARHGAP40Q5TG30 622 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 NIPAL1Q6NVV3 410 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 TRPM8Q7Z2W7 1104 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 FAM9CQ8IZT9 166 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 DSELQ8IZU8 1212 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 GALNT15Q8N3T1 639 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 OR7A2PQ8NGA2 310 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 PUM2Q8TB72 1066 aaKnown RBP eCLIP18■□□□□ 0.47
SMPD1-205ENST00000531303 CSF3RQ99062 836 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 FAIM2Q9BWQ8 316 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 NPLQ9BXD5 320 aaPredicted RBP18■□□□□ 0.47
SMPD1-205ENST00000531303 LYRM4Q9HD34 91 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 C5AR2Q9P296 337 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 PHF11Q9UIL8 331 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 EXO1Q9UQ84 846 aaKnown RBP18■□□□□ 0.47
SMPD1-205ENST00000531303 CFAP54Q96N23 3096 aa18■□□□□ 0.47
SMPD1-205ENST00000531303 SPTBN2O15020 2390 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 LOC100653049A0A140TA62 436 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 H0YIG0 161 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 NR5A2O00482 541 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 PROM1O43490 865 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 CPNE3O75131 537 aaKnown RBP17.99■□□□□ 0.47
SMPD1-205ENST00000531303 KRT34O76011 436 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 TNFSF15O95150 251 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 AIFM1O95831 613 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 COX7A2P14406 83 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 ITGAXP20702 1163 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 PRPS1L1P21108 318 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 POLR2JP52435 117 aaKnown RBP17.99■□□□□ 0.47
SMPD1-205ENST00000531303 DGKQP52824 942 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 ERV3-1Q14264 604 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 PRMT9Q6P2P2 845 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 FUNDC1Q8IVP5 155 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 POU5F2Q8N7G0 328 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 OR51Q1Q8NH59 317 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 MVB12AQ96EY5 273 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 GBP5Q96PP8 586 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 MIEF1Q9NQG6 463 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 SH3BP4Q9P0V3 963 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 TRPC4Q9UBN4 977 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 SPACA6W5XKT8 324 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 CCDC88CQ9P219 2028 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 PIEZO1Q92508 2521 aa17.99■□□□□ 0.47
SMPD1-205ENST00000531303 TEX51A0A1B0GUA7 166 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 CCT8L1PA6NM43 557 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 NR2F6P10588 404 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 RNH1P13489 461 aaKnown RBP17.98■□□□□ 0.47
SMPD1-205ENST00000531303 JAK1P23458 1154 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 BUD31P41223 144 aaPredicted RBP17.98■□□□□ 0.47
SMPD1-205ENST00000531303 CLNS1AP54105 237 aaKnown RBP17.98■□□□□ 0.47
SMPD1-205ENST00000531303 TNFRSF17Q02223 184 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms