RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 WASH2PQ6VEQ5 465 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 MOB2Q70IA6 237 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 PGAP1Q75T13 922 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 PAQR7Q86WK9 346 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SLC44A2Q8IWA5 706 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 C10orf111Q8N326 155 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 PROKR2Q8NFJ6 384 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 NTAN1Q96AB6 310 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 FAM120BQ96EK7 910 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 LCORQ96JN0 433 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ZBTB18Q99592 522 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 NFKBIZQ9BYH8 718 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 DDX31Q9H8H2 851 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ATP13A1Q9HD20 1204 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 EXOSC4Q9NPD3 245 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 TAS2R16Q9NYV7 291 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 PCTPQ9UKL6 214 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 DBX1A6NMT0 343 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SLC19A2O60779 497 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 EIF3GO75821 320 aaKnown RBP eCLIP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 S1PR4O95977 384 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 LCP1P13796 627 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 PRF1P14222 555 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SSTR4P31391 388 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 NUDT6P53370 316 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 PUM1Q14671 1186 aaKnown RBP eCLIP7.79□□□□□ -1.167e-7■■□□□ 11.5
CSDE1-214ENST00000530886 SPHARQ15513 63 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 DOK7Q18PE1 504 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SLC39A12Q504Y0 691 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 TMEM201Q5SNT2 666 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 STRIP1Q5VSL9 837 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 FUT10Q6P4F1 479 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ALKAL1Q6UXT8 129 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 NLRC3Q7RTR2 1065 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ABI3BPQ7Z7G0 1075 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SPATA2LQ8IUW3 424 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 CMIPQ8IY22 773 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 FAM9CQ8IZT9 166 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 NANOGP1Q8N7R0 232 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 OR9Q1Q8NGQ5 310 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SFXN2Q96NB2 322 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 TREX2Q9BQ50 279 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 YIPF4Q9BSR8 244 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 KATNB1Q9BVA0 655 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 CRISPLD1Q9H336 500 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 CLMPQ9H6B4 373 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 BRD9Q9H8M2 597 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 AMBNQ9NP70 447 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ISYNA1Q9NPH2 558 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 PADI2Q9Y2J8 665 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SCN8AQ9UQD0 1980 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 YDJCA8MPS7 323 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ADAM12O43184 909 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 RAD1O60671 282 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 FBP1P09467 338 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 CXCL8P10145 99 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SFTPCP11686 197 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 LCN1P31025 176 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 FGF9P31371 208 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 AMHR2Q16671 573 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 BCL2L15Q5TBC7 163 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 AFTPHQ6ULP2 937 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 STX12Q86Y82 276 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ADGRG2Q8IZP9 1017 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 OR56A4Q8NGH8 313 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SLC5A11Q8WWX8 675 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 OTULINQ96BN8 352 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 LRRC46Q96FV0 321 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SCRN2Q96FV2 425 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 C7orf34Q96L11 122 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 FAM193BQ96PV7 902 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SEMA4CQ9C0C4 833 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 DERL2Q9GZP9 239 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 MFSD1Q9H3U5 465 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SEBOXQ9HB31 216 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ARNT2Q9HBZ2 717 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 RNF19AQ9NV58 838 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SPATA2Q9UM82 520 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 A0A1B0GTQ1 180 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 PLSCR5A0PG75 271 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 EFCAB7A8K855 629 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 GABRDO14764 452 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ADAMDEC1O15204 470 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 SGCEO43556 437 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 LZTS3O60299 673 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 CCNB2O95067 398 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ERCC2P18074 760 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 RHCEP18577 417 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 PTPN6P29350 595 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 ICAM3P32942 547 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 BDKRB1P46663 353 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 VEGFCP49767 419 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 YWHAHQ04917 246 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 CRYZQ08257 329 aaKnown RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 LGALS3BPQ08380 585 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 STX4Q12846 297 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 MAD2L1Q13257 205 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-214ENST00000530886 FGL2Q14314 439 aa7.79□□□□□ -1.16
CSDE1-214ENST00000530886 P2RY14Q15391 338 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms