RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	RAB28	P51157	221 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	MTPN	P58546	118 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	ERVPABLB-1	P60509	514 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	ISL1	P61371	349 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	HHEX	Q03014	270 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	KCNAB2	Q13303	367 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	TCEA2	Q15560	299 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	MEP1A	Q16819	746 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	PRAMEF14	Q5SWL7	426 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	CYP20A1	Q6UW02	462 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	SCIMP	Q6UWF3	145 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	RNF165	Q6ZSG1	346 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	LRRC70	Q7Z2Q7	622 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC37A2	Q8TED4	501 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	SGCD	Q92629	289 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC47A1	Q96FL8	570 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	PPM1M	Q96MI6	270 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	NODAL	Q96S42	347 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	PCBD2	Q9H0N5	130 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	FBXO8	Q9NRD0	319 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	WARS2	Q9UGM6	360 aa	Known RBP	13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	TMED5	Q9Y3A6	229 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	HCN4	Q9Y3Q4	1203 aa		13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	CFAP20	Q9Y6A4	193 aa	Known RBP	13.94	□□□□□ -0.18
NR1H3-231	ENST00000529540	TP53BP1	Q12888	1972 aa	Predicted RBP	13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540		M0QX08	132 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC16A8	O95907	504 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	ERG	P11308	486 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	HPCAL1	P37235	193 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC19A1	P41440	591 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	RAD23A	P54725	363 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	UBE2I	P63279	158 aa	Known RBP	13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	SHB	Q15464	509 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	NKG7	Q16617	165 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	IMPG1	Q17R60	797 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	DEFB133	Q30KQ1	61 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	C14orf28	Q4W4Y0	310 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	AGAP7P	Q5VUJ5	663 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	C17orf82	Q86X59	251 aa	Predicted RBP	13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC25A45	Q8N413	288 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	MFSD4A	Q8N468	514 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR2T12	Q8NG77	320 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR4C6	Q8NH72	309 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	CAMK1G	Q96NX5	476 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	PKP4	Q99569	1192 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	GTPBP2	Q9BX10	602 aa	Known RBP	13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	PIF1	Q9H611	641 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	SMURF2	Q9HAU4	748 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	NECTIN3	Q9NQS3	549 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR6C2	Q9NZP2	312 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	STOX2	Q9P2F5	926 aa	Predicted RBP	13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	NCDN	Q9UBB6	729 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	C3orf18	Q9UK00	162 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	GON4L	Q3T8J9	2241 aa		13.93	□□□□□ -0.18
NR1H3-231	ENST00000529540	LSM1	O15116	133 aa	Known RBP	13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	GSTA4	O15217	222 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	STK16	O75716	305 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	EML2	O95834	649 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	CST1	P01037	141 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	G6PD	P11413	515 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	ACVR2A	P27037	513 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	SOX11	P35716	441 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	PIGA	P37287	484 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	PNLIPRP1	P54315	467 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	CYP4F3	Q08477	520 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC14A1	Q13336	389 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	AGTRAP	Q6RW13	159 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	ENPP6	Q6UWR7	440 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	KLHDC8A	Q8IYD2	350 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	SYTL1	Q8IYJ3	562 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	CDYL2	Q8N8U2	506 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	GPR156	Q8NFN8	814 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR52E1	Q8NGJ3	308 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	FAR1	Q8WVX9	515 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC22A18	Q96BI1	424 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	TBC1D20	Q96BZ9	403 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	YIPF6	Q96EC8	236 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	SH3GL1	Q99961	368 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	CD244	Q9BZW8	370 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC32A1	Q9H598	525 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	ACTR8	Q9H981	624 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	UCKL1	Q9NWZ5	548 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	OPTC	Q9UBM4	332 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	PCDH15	Q96QU1	1955 aa		13.92	□□□□□ -0.18
NR1H3-231	ENST00000529540	LOC100130705	A0A1B0GUX0	176 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	HTR3E	A5X5Y0	456 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	NUDT21	O43809	227 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	MRPS14	O60783	128 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	NTRK1	P04629	796 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	PCNA	P12004	261 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	IMPA1	P29218	277 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	GRK3	P35626	688 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	HTR6	P50406	440 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	CSRP2	Q16527	193 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	BCL2A1	Q16548	175 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms