RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 KHDRBS2Q5VWX1 349 aaKnown RBP30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 GTF2H2CQ6P1K8 395 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 ZNF793Q6ZN11 406 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 CNPY4Q8N129 248 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 L3MBTL4Q8NA19 623 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 FAM47BQ8NA70 645 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 TMEM52Q8NDY8 209 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 REPS1Q96D71 796 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 PSMG3-AS1Q96PY0 264 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 OLAHQ9NV23 265 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 ZNF358Q9NW07 568 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 KCMF1Q9P0J7 381 aa30.92■■■□□ 2.54
SSSCA1-205ENST00000527920 BLACEA4D250 179 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 STX16-NPEPL1H3BU86 382 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 STX16O14662 325 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 HIST1H1TP22492 207 aaPredicted RBP30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 HNRNPFP52597 415 aaKnown RBP30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 SLC13A2Q13183 592 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 TUBA3CQ13748 450 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 DEPDC1Q5TB30 811 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 LGSNQ5TDP6 509 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 TUBA3EQ6PEY2 450 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 GOLGA7Q7Z5G4 137 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 ACOT4Q8N9L9 421 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 HUS1BQ8NHY5 278 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 UHMK1Q8TAS1 419 aaKnown RBP30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 PRR7Q8TB68 274 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 TAAR6Q96RI8 345 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 UTP23Q9BRU9 249 aaKnown RBP30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 CENPKQ9BS16 269 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 XPR1Q9UBH6 696 aa30.91■■■□□ 2.54
SSSCA1-205ENST00000527920 SPTBN1Q01082 2364 aaKnown RBP30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 LRRC14BA6NHZ5 514 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 CTNSO60931 367 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 SEMA7AO75326 666 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 TGFB1P01137 390 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 AP5B1Q2VPB7 878 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 RPS19BP1Q86WX3 136 aaKnown RBP30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 KIF2BQ8N4N8 673 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 PTGR2Q8N8N7 351 aaPredicted RBP30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 MDS2Q8NDY4 140 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 B3GNT7Q8NFL0 401 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 DNAJB8Q8NHS0 232 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 MTBPQ96DY7 904 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 CSF3RQ99062 836 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 IPPKQ9H8X2 491 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 ADAP2Q9NPF8 381 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 DMRT3Q9NQL9 472 aa30.9■■■□□ 2.54
SSSCA1-205ENST00000527920 TGFBR3LH3BV60 316 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 RIPK2O43353 540 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 SIX3O95343 332 aaPredicted RBP30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 PHEXP78562 749 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 TIFABQ6ZNK6 161 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 MYLK4Q86YV6 388 aaPredicted RBP30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 EIF1ADQ8N9N8 165 aaKnown RBP30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 APCDD1LQ8NCL9 501 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 C7orf57Q8NEG2 295 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 SSC4DQ8WTU2 575 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 NR4A3Q92570 626 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 MRPL57Q9BQC6 102 aaKnown RBP30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 MRPL46Q9H2W6 279 aaKnown RBP30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 PSD3Q9NYI0 1048 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 FETUBQ9UGM5 382 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 SPACA6W5XKT8 324 aa30.89■■■□□ 2.54
SSSCA1-205ENST00000527920 GABRR3A8MPY1 467 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 MAN1A2O60476 641 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 MYO1DO94832 1006 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 RASAL1O95294 804 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 CRYABP02511 175 aaKnown RBP30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 RHOXF2BP0C7M4 288 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 CD96P40200 585 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 SSR2P43308 183 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 ZNF766Q5HY98 468 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 ADGRD1Q6QNK2 874 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 HORMAD2Q8N7B1 307 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 RGMAQ96B86 450 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 RHOXF2Q9BQY4 288 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 TXLNGYQ9BZA5 131 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 OR51B5Q9H339 312 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 CDCP1Q9H5V8 836 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 PPT2Q9UMR5 302 aa30.88■■■□□ 2.53
SSSCA1-205ENST00000527920 SMIM24O75264 130 aa30.87■■■□□ 2.53
SSSCA1-205ENST00000527920 DDAH2O95865 285 aa30.87■■■□□ 2.53
SSSCA1-205ENST00000527920 EEF1DP29692 281 aaKnown RBP30.87■■■□□ 2.53
SSSCA1-205ENST00000527920 MLF1P58340 268 aa30.87■■■□□ 2.53
SSSCA1-205ENST00000527920 ELAVL1Q15717 326 aaKnown RBP30.87■■■□□ 2.53
SSSCA1-205ENST00000527920 SCYL1Q96KG9 808 aa30.87■■■□□ 2.53
SSSCA1-205ENST00000527920 TRIM45Q9H8W5 580 aaPredicted RBP30.87■■■□□ 2.53
SSSCA1-205ENST00000527920 PRM3Q9NNZ6 103 aa30.87■■■□□ 2.53
SSSCA1-205ENST00000527920 DOPEY1Q5JWR5 2465 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 A8MUA0 341 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 RTCAO00442 366 aaKnown RBP30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 PTX3P26022 381 aaPredicted RBP30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 GCAP28676 217 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 CLCN2P51788 898 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 GPR143P51810 404 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 TDGF1P3P51864 188 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 DDX39BQ13838 428 aaKnown RBP30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 OR1C1Q15619 314 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 C10orf62Q5T681 223 aaPredicted RBP30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms