RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PCDH8O95206 1070 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 TRIM23P36406 574 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 FRKP42685 505 aaPredicted RBP14.63□□□□□ -0.07
USH1C-207ENST00000527720 XCR1P46094 333 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 CASP9P55211 416 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 CST6Q15828 149 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 REEP3Q6NUK4 255 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 NUDT13Q86X67 352 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 ADGRF3Q8IZF5 1079 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 YIPF6Q96EC8 236 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 PIP5K1AQ99755 562 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 WDR26Q9H7D7 661 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 CXorf36Q9H7Y0 433 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 CUEDC1Q9NWM3 386 aaPredicted RBP14.63□□□□□ -0.07
USH1C-207ENST00000527720 STON1Q9Y6Q2 735 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 A0A1W2PPV9 198 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 ARRDC5A6NEK1 342 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 MID1O15344 667 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 PDPK1O15530 556 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 MT-ND2P03891 347 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 C5AR1P21730 350 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 ST13P50502 369 aaKnown RBP14.63□□□□□ -0.07
USH1C-207ENST00000527720 CDH12P55289 794 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 TRA2BP62995 288 aaKnown RBP14.63□□□□□ -0.07
USH1C-207ENST00000527720 AQP6Q13520 282 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 CLCA4Q14CN2 919 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 ZNF605Q86T29 641 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 P3H2Q8IVL5 708 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 SLC5A8Q8N695 610 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 APH1BQ8WW43 257 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 TRUB1Q8WWH5 349 aaKnown RBP14.63□□□□□ -0.07
USH1C-207ENST00000527720 RGMAQ96B86 450 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 F2RL3Q96RI0 385 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 A4GALTQ9NPC4 353 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 ACOT13Q9NPJ3 140 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 TM7SF3Q9NS93 570 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 FAM32AQ9Y421 112 aaKnown RBP14.63□□□□□ -0.07
USH1C-207ENST00000527720 ENPP4Q9Y6X5 453 aa14.63□□□□□ -0.07
USH1C-207ENST00000527720 PRAMEF25A6NGN4 478 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 APODP05090 189 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 RHCEP18577 417 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 OR1E2P47887 323 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 LIMS1P48059 325 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 MASP1P48740 699 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 CLCNKAP51800 687 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 MANFP55145 182 aaKnown RBP14.62□□□□□ -0.07
USH1C-207ENST00000527720 C21orf59P57076 290 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 KCNC4Q03721 635 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 SPCS2Q15005 226 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.62□□□□□ -0.07
USH1C-207ENST00000527720 LGI4Q8N135 537 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 DEPDC4Q8N2C3 294 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 FCGR1BQ92637 280 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 KCNC2Q96PR1 638 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 RAB11FIP5Q9BXF6 653 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 PHPT1Q9NRX4 125 aaPredicted RBP14.62□□□□□ -0.07
USH1C-207ENST00000527720 RASSF1Q9NS23 344 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 TMEM184CQ9NVA4 438 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 AASSQ9UDR5 926 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 RNF6Q9Y252 685 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 PCDHGA2Q9Y5H1 932 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 CFAP20Q9Y6A4 193 aaKnown RBP14.62□□□□□ -0.07
USH1C-207ENST00000527720 NDUFS4O43181 175 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 FOXD2O60548 495 aaPredicted RBP14.62□□□□□ -0.07
USH1C-207ENST00000527720 KCNJ13O60928 360 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 TNFRSF1BP20333 461 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 BMXP51813 675 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 PCBP4P57723 403 aaKnown RBP14.62□□□□□ -0.07
USH1C-207ENST00000527720 MLC1Q15049 377 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 SMN1Q16637 294 aaKnown RBP14.62□□□□□ -0.07
USH1C-207ENST00000527720 EXOC3L2Q2M3D2 409 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 KIAA1161Q6NSJ0 714 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 GPR153Q6NV75 609 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 CEACAM20Q6UY09 585 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 YAF2Q8IY57 180 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 MMP21Q8N119 569 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 PARP8Q8N3A8 854 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 TTLQ8NG68 377 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 MIPOL1Q8TD10 442 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 TIMM29Q9BSF4 260 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 RMI1Q9H9A7 625 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 ZNF556Q9HAH1 456 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 PREBQ9HCU5 417 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 ZDHHC4Q9NPG8 344 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 ACER3Q9NUN7 267 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 HCN4Q9Y3Q4 1203 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 ZNF451Q9Y4E5 1061 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 SNX8Q9Y5X2 465 aa14.62□□□□□ -0.07
USH1C-207ENST00000527720 NINQ8N4C6 2090 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 PRAMEF33A0A0G2JMD5 474 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 H7BY64 318 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 PRAMEF10O60809 474 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 CLEC3AO75596 197 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 PDE9AO76083 593 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 IFNW1P05000 195 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 MAP2K4P45985 399 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 CYP4F2P78329 520 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 IRF4Q15306 451 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 UBE2UQ5VVX9 321 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 P2RY8Q86VZ1 359 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms